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	<title>Darwin, Then and Now &#187; Origin of Species</title>
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	<description>The Most Amazing Story in the History of Science</description>
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		<title>Dinosaur Embryo Fossils, Evidence for Evolution?</title>
		<link>http://www.darwinthenandnow.com/2012/01/dinosaur-embryo-fossils-evidence-for-evolution/</link>
		<comments>http://www.darwinthenandnow.com/2012/01/dinosaur-embryo-fossils-evidence-for-evolution/#comments</comments>
		<pubDate>Mon, 30 Jan 2012 01:12:24 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[What Darwin Said]]></category>
		<category><![CDATA[What Scientists Say]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[Dinosaur]]></category>
		<category><![CDATA[embryology]]></category>
		<category><![CDATA[fossil record]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[theory of evolution]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3784</guid>
		<description><![CDATA["Why then is not every geological formation [fossil record] and every stratum full of such intermediate links? Geology assuredly does not reveal any such finely graduated organic chain; and this, perhaps, is the most obvious and serious objection which can be urged against my theory." Charles Darwin]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2012/01/dinosaur-embryo-fossils-evidence-for-evolution/dinosaur-embryo-egg-cluster-soutrh-africa-ii/" rel="attachment wp-att-3788"><img class="alignleft  wp-image-3788" title="Dinosaur Embryo Egg Cluster - Soutrh Africa II" src="http://www.darwinthenandnow.com/wp-content/uploads/2012/01/Dinosaur-Embryo-Egg-Cluster-Soutrh-Africa-II-300x247.jpg" alt="" width="180" height="148" /></a>In the sedimentary <a href="http://en.wikipedia.org/wiki/Golden_Gate_Highlands_National_Park">Golden Gate Highlands National Park</a> rocks of South Africa in 1976 during road construction uncovered a paleontologist’s goldmine−a dinosaur nesting site.</p>
<p>The discovery eventually launched an international exploration the area the South African hills that started in 2006. This week, the results of the explorations were published in the <em><a href="http://www.pnas.org/content/early/2012/01/23/1109385109.abstract">Proceedings of the National Academy of Sciences</a> </em>(PNAS).  <a href="http://www.erin.utoronto.ca/~w3reisz/">Robert Reisz</a> of the University of Toronto was the lead author.<span id="more-3784"></span></p>
<p>Since 2005, ten nests have been discovered at several levels at this site, each with up to 34 round eggs in tightly clustered and carefully arranged clutches. The distribution of the nests in the sediments indicate that these early dinosaurs returned repeatedly (nesting site fidelity) to this site, and likely assembled in groups (colonial nesting) to lay their eggs.</p>
<p>Seven eggs are demonstrated in the image with one of the eggs scrapped open to reveal the underlying embryonic form of the dinosaur skeleton.</p>
<p>“Thus, fossil and sedimentological evidence from this nesting site provides empirical data on reproductive strategies in early dinosaurs”, the report concluded. The reproductive strategies discovered include: 1) repeated returns to the nesting site and 2) grouping of the eggs.</p>
<p>Entitled “Oldest known dinosaurian nesting site and reproductive biology of the Early Jurassic sauropodomorph <em>Massospondylus</em>”<em>, </em>the report<em> </em>was a featured story by the <a href="http://smithsonianscience.org/2012/01/190-million-year-old-dinosaur-nesting-site-found-in-south-africa/">Smithsonian Institute</a>, <a href="http://www.bbc.co.uk/news/science-environment-16697954">BBC News</a>, <a href="http://www.sciencedaily.com/releases/2012/01/120123152505.htm">Science Daily</a>, <a href="http://www.forbes.com/sites/alexknapp/2012/01/25/paleontologists-find-oldest-dinosaur-nesting-site/">Forbes</a>, and <a href="http://www.huffingtonpost.co.uk/2012/01/24/massospondylus-oldest-dinosaur-nest-ever-found-in-south-africa_n_1227942.html">The Huffington Post</a>.</p>
<p>Amazingly, the report then claims that the evidence from the nests “provides additional insights into the initial stages of the evolutionary history of dinosaurs”. While the claim is intriguing, evidence from dinosaur nests cannot be used to validate a presupposed history of evolution.</p>
<p>Evidence for evolution requires transitional links between species, not evidence from nests within a species−typical evolution red-flag spin. In fact the report never even attempt to mention how these nests could even hope to provide evidence of transitional links between dinosaur species.</p>
<p>In<a href="http://darwin-online.org.uk/contents.html#origin"> <em>The Origin of Species</em></a>, <a href="http://darwin-online.org.uk/">Charles Darwin</a> cut to the chase what investigators should be looking for: “We should always look for forms intermediate between each species” Reisz PNAS report just presumes that evolution magically happened, never even mentioning transitional intermediate links.</p>
<p>Simply finding and reporting on fossils is not evidence for evolution.  By using the words “dinosaur”, “fossil” and “evolution” together, the evolution industry is attempting to hoodwink support for evolution−a common trick.</p>
<p>More than 150 years ago, Darwin recognized that the fossil record was not kind to even his theory of evolution -</p>
<blockquote><p>Why then is not every geological formation [fossil record] and every stratum full of such intermediate links? Geology assuredly does not reveal any such finely graduated organic chain; and this, perhaps, is the most obvious and serious objection which can be urged against my theory.</p></blockquote>
<p>The late <a href="http://en.wikipedia.org/wiki/Stephen_Jay_Gould">Stephen Gould</a> in <a href="http://en.wikipedia.org/wiki/The_Panda%27s_Thumb_(book)"><em>The Panda’s Thumb</em></a> recognized Darwin’s dilemma noting that the “fossil record had caused Darwin more grief than joy. Nothing distressed him more”.</p>
<p>Isolated evidence from the nests of a single dinosaur species alone cannot provide “additional insights into the initial stages of the evolutionary history of dinosaurs”. What evolution needs are the missing transitional links.</p>
<p>In an attempt to work-around the vacuum of transitional links that Darwin said should be found to exist once the Earth had been fully explored, committed evolutionary paleontologists have resorted to these hoodwinking tricks.</p>
<p>The absence of transitional links to support Darwin’s “slight, successive” gradual evolution changes is undeniable. <a href="http://www.nileseldredge.com/">Niles Eldredge</a>, paleontologist at the <a href="http://www.amnh.org/science/divisions/paleo/bio.php?scientist=eldredge">American Museum of Natural History</a> concluded -</p>
<blockquote><p>Paleontologists have been insisting that their record is consistent with slow, steady, gradual evolution where I think that privately, they’ve known for over a hundred years that such is not the case.</p></blockquote>
<p>“It has been the paleontologist, my own breed,” Eldredge opined, “who has been most responsible for letting ideas dominate reality.”</p>
<div>
<p>According to <a href="http://members.iinet.net.au/~sejones/pattam01.html">Collin Patterson </a>of the <a href="http://www.britishmuseum.org/">British Museum of Natural History</a>, “Fossils may tell us many things, but one thing they can never disclose is whether they were ancestors of anything else.”</p>
<p>This week’s hyped report by Reisz is yet another vain attempt to give an illusion that the fossil record supports evolution. Fortunately, the report did not make the major media markets.</p>
<p>Evolution was once a theory in crisis, now evolution is in crisis without a theory−a conclusion based on the fossil record evidence.</p>
</div>
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		<title>Charles Darwin Fossils Rediscovered</title>
		<link>http://www.darwinthenandnow.com/2012/01/charles-darwin-fossils-rediscovered/</link>
		<comments>http://www.darwinthenandnow.com/2012/01/charles-darwin-fossils-rediscovered/#comments</comments>
		<pubDate>Mon, 23 Jan 2012 02:57:37 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[What Darwin Said]]></category>
		<category><![CDATA[What Scientists Say]]></category>
		<category><![CDATA[British Geological Survey]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[fossil record]]></category>
		<category><![CDATA[Howard Falcon-Lang]]></category>
		<category><![CDATA[John Ludden]]></category>
		<category><![CDATA[Origin of Species]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3772</guid>
		<description><![CDATA["This is quite a remarkable discovery," John Ludden, executive director of the Geological Survey, said. "It really makes one wonder what else might be hiding in our collections." Could the fossil wood specimens be Darwin’s holy fossil grail? Probably not.]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2012/01/charles-darwin-fossils-rediscovered/holloway-fossils/" rel="attachment wp-att-3780"><img class="alignleft  wp-image-3780" title="Holloway Fossils" src="http://www.darwinthenandnow.com/wp-content/uploads/2012/01/Holloway-Fossils-264x300.jpg" alt="" width="158" height="180" /></a>A “treasure trove” of <a href="http://darwin-online.org.uk/">Charles Darwin</a> fossils, rediscovered in a “gloomy corner” of the <a href="http://www.bgs.ac.uk/">British Geological Survey </a>(BGS) building where it lay unnoticed for more than 150 years, was one of this week’s media highlights.  The story was covered by <em>CBS</em>, <em>FOX</em>, <em>ABC</em>, <em>BBC</em>, <em>USA Toda</em>y, <em>Christian Science Monito</em>r, <em>Associated Press</em>, and the <em>Wall Street Journal</em>.</p>
<p>In April 2011, British palaeontologist <a href="http://www.linkedin.com/pub/howard-falcon-lang/22/1b5/4a0">Howard Falcon-Lang</a> at <a href="http://www.london.ac.uk/2393.html?&amp;no_cache=1&amp;sword_list[]=holloway">Royal Holloway</a>, <a href="http://lon.ac.uk/">University of London</a>, walking through the GBS building of earth sciences spotted an old wooden cabinet hidden in a forgotten corner and “pulled open the door without breaking it, and found a series of drawers containing hundreds of rock samples.&#8221;</p>
<p>Normal enough stuff, until he took one out.<span id="more-3772"></span></p>
<p>&#8220;I held it up to the light and tried to make out the words on the slide and there was the signature: C. Darwin, Esquire,&#8221; Falcon-Lang says, adding he could &#8220;hardly believe it. My heart was pounding all around my body.&#8221;</p>
<p>&#8220;Inside the drawer were hundreds of beautiful glass slides made by polishing fossil plants into thin translucent sheets,&#8221; Dr Falcon-Lang explained. &#8220;This process allows them to be studied under the microscope. Almost the first slide I picked up was labeled &#8216;C. Darwin Esq.&#8217;&#8221;</p>
<p>The specimen was a piece of fossil wood collected along the South American coast during his famous <a href="http://darwin-online.org.uk/contents.html#researches">Voyage of the Beagle</a> in 1834.</p>
<p>Most of the evidence Darwin used has been well documented, but the samples Howard Falcon-Lang accidentally found had been lost because Darwin entrusted them to a fellow scientist, <a href="http://www.jdhooker.org.uk/">Joseph Dalton Hooker</a>. Hooker did not number these fossils, a problem now for a warehouse with more that 10 million rock samples. Hooker became a close friend of Darwin.</p>
<p>Hooker had assembled this collection of 314 slides while working for the BGS in 1846. The slides &#8211; &#8220;stunning works of art,&#8221; according to Falcon-Lang, contain bits of fossil wood and plants ground into thin sheets and affixed to glass in order to be studied under microscopes.</p>
<p><a href="http://www.bgs.ac.uk/staff/profiles/6885.html">John Ludden</a>, executive director of BGS said: &#8220;This is quite a remarkable discovery. It really makes one wonder what else might be hiding in our collections.&#8221;</p>
<p>The discovery was made in April, but it has taken &#8220;a long time&#8221; to figure out the provenance of the slides and photograph all of them, Falcon-Lang said. The slides have now been photographed and will be made available to the public through a new online museum exhibit opening Tuesday.</p>
<p>“Scientists are only now starting to study it and understand its scientific importance,&#8221; according to Falcon-Lang.</p>
<p>&#8220;This is quite a remarkable discovery,&#8221; John Ludden, executive director of the Geological Survey, said. &#8220;It really makes one wonder what else might be hiding in our collections.&#8221; Could the fossil wood specimens be Darwin’s holy fossil grail? Probably not.</p>
<p>In <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species</em></a>, Darwin never used fossilized trees to as examples of evolutionary transitional forms. While the specimens Falcon-Lang rediscovered are stunning, the specimens failed to capture a convincing attention of Darwin or Hooker. Historically, little evidence has been gleaned from fossilized plants or from fossilized animals.</p>
<p>Even the infamous evolution of the horse story espoused by Darwin in <em>The Origin of Species</em> was disintegrated in the twentieth century.</p>
<p>Grasping for significance in the wood fossil highlights the problem with the theory of evolution – lack of fossil record evidence for Darwin’s “innumerable transition” links in the fossil record.  In fact, the lack of fossilized transitional links was a known problem in 1834, and the problem continues to persist.</p>
<p>“The distinctiveness of specific forms and their not being blended together in innumerable transitional links”, Darwin argued in 1872 edition of <em>The Origin of Species</em>, “is a very obvious difficulty.” Darwin continued, “Geology [the fossil record} assuredly does not reveal any such finely graduated organic chain; and this, perhaps, is the most obvious and serious objection which can be urged against my theory.”</p>
<p>In the words of American evolutionary biologist <a href="http://www.stephenjaygould.org/original.html">Stephen Jay Gould</a>, “fossil record had caused Darwin more grief than joy.”</p>
<p>In the Presidential Address at the <em>Geological Association,</em> <a href="http://www.velikovsky.info/Derek_Ager">Derek V. Age</a>r dismayed of the fossil record, went on the record to say, “It must be significant that nearly all the evolutionary stories I learned as a student … have now been ‘debunked.”</p>
<p>Senior paleontologist of the British Museum of Natural History, <a href="http://www.encyclopedia.com/doc/1G2-2830905989.html">Colin Patterson</a>, brings the importance of the fossil record into perspective: “Fossils may tell us many things, but one thing they can never disclose is whether they were ancestors of anything else.”</p>
<p>While Darwin would not be surprised by Gould, Ager, or at Colin Patterson comments, he would be disappointed in the intense interest in the trivial evidence shown by the media.</p>
<p>The evolution industry was once a theory in crisis, now the evolution industry is in crisis without a theory−with believers begging for any scrap of evidence.</p>
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		</item>
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		<title>The Origin of Species Evolution</title>
		<link>http://www.darwinthenandnow.com/2012/01/the-origin-of-species-evolution/</link>
		<comments>http://www.darwinthenandnow.com/2012/01/the-origin-of-species-evolution/#comments</comments>
		<pubDate>Mon, 16 Jan 2012 00:45:36 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[What Darwin Said]]></category>
		<category><![CDATA[What Scientists Say]]></category>
		<category><![CDATA[Ben Fry]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[natural selection]]></category>
		<category><![CDATA[Origin of Species]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3758</guid>
		<description><![CDATA[Ben Fry of Computational Information Design has retraced these evolutionary changes through Darwin’s six editions, chapter by chapter, highlighting the changes in a color-coded greeked version of the text at pixel-scale, as seen in the illustration.]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2012/01/the-origin-of-species-evolution/print/" rel="attachment wp-att-3762"><img class="alignleft size-medium wp-image-3762" title="Print" src="http://www.darwinthenandnow.com/wp-content/uploads/2012/01/Origin-of-Species-Digital-Display-III-300x213.jpg" alt="" width="300" height="213" /></a></p>
<p>&nbsp;</p>
<p>In November 1859, <a href="http://darwin-online.org.uk/">Charles Darwin</a> released the first edition of <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species</em></a>. While an instant worldwide sensation &#8211; all 1250 copies sold on the first day &#8211; critics kept Darwin returning to the drawing board. Over the next thirteen years, Darwin edited, added and deleted major sections of <em>The Origin of Species</em> eventually leading to six editions. The Sixth Edition was published in February 1872.</p>
<p>Now, <a href="http://benfry.com/about/">Ben Fry</a> of Computational Information Design has retraced these evolutionary changes through Darwin’s six editions, chapter by chapter, highlighting the changes in a color-coded greeked version of the text at pixel-scale, as seen in the illustration.<span id="more-3758"></span></p>
<p>Wordsmithing Darwin’s title, Fly entitled his project “<a href="http://benfry.com/traces/">On The Origin of Species: The Preservation of Favored Traces</a>” – substituting “species” with “traces”.</p>
<p>In collaboration with John van Wyhe, founder and director of <a href="http://darwin-online.org.uk/">The Complete Work of Charles Darwin Online</a>, Fry graphically details the evolution of Darwin&#8217;s book. On the website, Fry animates Darwin’s changes over time starting with the First Edition with the actual specific changes to the text viewable while hovering with the mouse.</p>
<p>According to Fry, this is “a simpler version of a larger effort that looks at the changes between editions, and is intended as the first in a series looking at how the book evolved over time”.</p>
<p>While <em>The Origin of Species </em>started with fourteen chapters, Darwin expanded the number of chapters to fifteen chapters with the addition of “Objections to the Theory of Natural Selection”. It was not until the last edition, the Sixth Edition, Darwin that used the term “evolution” for the first time.</p>
<p>Darwin used the successive editions to address a wide range of criticisms and to align with emerging evolutionary concepts of the time. The key phrase associated with <em>The Origin of Species,</em> “survival of the fittest,” did not appear until the Fifth Edition. In the First Edition, the title of Chapter IV was “Natural Selection.” By the Fifth Edition, the title was changed to “Natural Selection; or the Survival of the Fittest.”</p>
<p>With each successive edition, the length of the book increased, from 3,878 in the first edition to 5,088 sentences. According to <a href="http://www.upenn.edu/pennpress/book/440.html">Morse Peckham</a> of the <a href="http://www.upenn.edu/pennpress/">University of Pennsylvania Press</a>, between just the Fifth and Sixth Edition, Darwin changed twenty-nine percent of the sentences.</p>
<p>Today, the Sixth Edition is considered Darwin’s final word. Like an artist, though, a creative work is never complete. In 1869, Darwin expressed in a<a href="http://darwin-online.org.uk/content/frameset?itemID=F1497&amp;viewtype=text&amp;pageseq=1"> letter </a>to <a href="http://en.wikipedia.org/wiki/J.D._Hooker">Joseph Hooker</a> that if “I lived twenty more years and was able to work, how I should have to modify the <em>Origin</em>, and how much the views on all points will have to be modified!”</p>
<p>The fact that <em>The Origin of Species</em> is not used at any level, high school or university, in the teaching of scientific principles indicates that Darwin’s work is, in all practicality, philosophical, not scientific. Unlike the natural laws discovered by <a href="http://www.newton.ac.uk/newtlife.html">Isaac Newton</a> and <a href="http://www.nobelprize.org/nobel_prizes/physics/laureates/1921/einstein-bio.html">Albert Einstein</a>, Darwin was forced to constantly revise his proposed natural law− natural selection.</p>
<p>The constant revisions trapped Darwin into a litany of contradictions on the subject of natural selection. Contradictions on fifteen aspects are detailed in<em> <a href="http://www.darwinthenandnow.com/darwin-quotations/natural-selection/">Darwin, Then and Now – The Most Amazing Story in the History of Science. </a></em></p>
<p>While arguing that “There is no logical impossibility in the acquirement of any conceivable degree of perfection through natural selection” in one context, Darwin flips the argument to “Natural selection will not produce absolute perfection” in another context.</p>
<p>Even <a href="http://en.wikipedia.org/wiki/Charles_Lyell">Charles Lyle</a>, the founder of modern geology, recognizing the contradictions rejected natural selection as a natural law.</p>
<p>In <a href="http://www.amazon.com/What-Darwin-Wrong-Jerry-Fodor/dp/0374288798"><em>What Darwin Got Wrong</em></a> (2010)<strong><em>,</em></strong> self-proclaimed “out-right, card-carrying, sign-up, dye-in-the-wool, no-holds barred atheists” <a href="http://ruccs.rutgers.edu/faculty/Fodor/cv.html">Jerry Fodor </a>of Rutgers University and <a href="http://www.dingo.sbs.arizona.edu/~massimo/">Massimo Piattelli-Palmarini</a> of the University of Arizona pined that “Darwin’s theory of natural selection is fatally flawed” because “the theory of natural selection is internally flawed” and now stands as an “intensional fallacy”.</p>
<p>Keenly aware of the theoretical and practical problems presented in <em>The Origin of Species, </em>in Chapter XIV Darwin, dismissed the mounting criticism. “The several classes of facts which have been considered … innumerable species … are all descended”, argued Darwin, “even if it were unsupported by other facts or arguments.” For Darwin, evolution was considered a fact, even in the absence of scientific evidence.</p>
<p>Amazingly, Darwin clearly recognized the problem with his theory. In a <a href="http://www.darwinproject.ac.uk/entry-3746">letter</a> to <a href="http://en.wikipedia.org/wiki/Hugh_Falconer">Hugh Falconer</a> in October 1862, Darwin wrote, “I look at it as absolutely certain that very much in the <em>Origin</em><em> </em>will be proved to be rubbish.”</p>
<p>Even in the <em>Introduction </em>of <em>The Origin of Species</em> Darwin recognized the inadequacy of the theory: “I am well aware that scarcely a single point is discussed in this volume on which facts cannot be adduced, often apparently leading to conclusions directly opposite to those at which I have arrived.”</p>
<p>Darwin was clearly not satisfied with <em>The Origin of Species</em>. In the same year as the Fifth Edition in 1869, Darwin expressed in a letter to Joseph Hooker that if “I lived twenty more years and was able to work, how I should have to modify the <em>Origin,</em> and how much the views on all points will have to be modified!”</p>
<p>Today, as the <em>Origin of Species</em> evolution continues, Darwin’s influence only continues only as a philosophy, not as a science. The animation developed by Ben Rye illustrates the evolving nature of evolutionary philosophy−not a scientific fact.</p>
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		<title>Evolution, Floundering for Fossil Feathers</title>
		<link>http://www.darwinthenandnow.com/2012/01/evolution-floundering-for-fossil-feathers/</link>
		<comments>http://www.darwinthenandnow.com/2012/01/evolution-floundering-for-fossil-feathers/#comments</comments>
		<pubDate>Mon, 09 Jan 2012 02:24:08 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[What Scientists Say]]></category>
		<category><![CDATA[Archaeopteryx]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[dinosaur-bird]]></category>
		<category><![CDATA[evidence]]></category>
		<category><![CDATA[evolution]]></category>
		<category><![CDATA[feathers]]></category>
		<category><![CDATA[fossil record]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[transitional links]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3736</guid>
		<description><![CDATA[Since the Archaeopteryx discovery in 1860, evolutionists have continued to flounder for feathers in the fossil record long after the evidence has been weighed.  No small wonder that WIKIPEDIA opened the discussion of the Origin of Birds with “The origin of birds is a contentious and central topic within evolutionary biology.”]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2012/01/evolution-floundering-for-fossil-feathers/web-4/" rel="attachment wp-att-3753"><img class="alignleft  wp-image-3753" title="Web" src="http://www.darwinthenandnow.com/wp-content/uploads/2012/01/Dinosaur-Scale-+-Bird-Feather1-300x136.jpg" alt="" width="233" height="107" /></a>“The origin of birds is a contentious and central topic within <a title="Evolutionary biology" href="http://en.wikipedia.org/wiki/Evolutionary_biology">evolutionary biology</a>” in the WIKIPEDIA opening line of the article entitled <a href="http://en.wikipedia.org/wiki/Origin_of_birds">The Origin of Birds</a> gives insight to the current state of the dinosaur-to-bird evolutionary debate.</p>
<p>Famous British evolutionist <a href="http://richarddawkins.net/">Richard Dawkins</a> in <em><a href="http://www.creationists.org/response-to-nas-teaching-about-evolution-book.html">Teaching about Evolution and the Nature of Science</a></em> on the supporting side simply declares &#8220;Feathers are modified reptilian scales.”<span id="more-3736"></span></p>
<p>More than twenty species of dinosaur have been collected with preserve feathers.</p>
<p>While birds and dinosaurs share a range of common features such as feathers, hollow <a title="Pneumatized bones" href="http://en.wikipedia.org/wiki/Pneumatized_bones">pneumatized bones</a>, <a title="Gastrolith" href="http://en.wikipedia.org/wiki/Gastrolith">gastroliths</a> in the <a title="Gastrointestinal tract" href="http://en.wikipedia.org/wiki/Gastrointestinal_tract">digestive</a> system, nest-building and <a title="Avian incubation" href="http://en.wikipedia.org/wiki/Avian_incubation">brooding behaviors</a>, however, the sharing of features between different species is ubiquitous throughout nature. For example, while the eye of the octopus and human share common features, the octopus is not considered an ancestor to man.</p>
<p>Without fossil record evidence, ancestral relationship is simply speculative, at best. “Among the consensus that supports dinosaurian ancestry [of birds]”, WIKIPEDIA acknowledges, “the exact sequence of evolutionary events that gave rise to the early birds… is a hot topic.”</p>
<p>One of the major reasons for the dinosaur-to-bird evolutionary contention centers on evidence from the fossil record for the dinosaur scale gradually evolving into the bird feather.</p>
<p>Study on the origin of birds began shortly after the 1859 publication of <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species</em></a> by <a title="Charles Darwin" href="http://en.wikipedia.org/wiki/Charles_Darwin">Charles Darwin</a>. Described as a nearly complete skeleton in 1863, a new fossil bird discovery was noted to have reptilian features, including clawed forelimbs and a long, bony tail<em></em><em>−</em>part bird and part reptile features.</p>
<p>The bird fossil was named <a href="http://blog.hmns.org/?p=6630"><em>Archaeopteryx lithography</em></a><em>−</em><em>Archaeopteryx</em><em> </em>meaning “ancient wing.” The <em>Archaeopteryx</em> feather is recognized as one of the most beautiful fossils ever unearthed.</p>
<p>Given the optimal fossil conditions in German limestone, even the finest detail structures of the feather have been preserved. Armed with a combination of dinosaur and bird features, the <em>Archaeopteryx </em>launched the dinosaur-to-bird controversy.  By the sixth edition of <em>The Origin of Species</em> in 1872, Darwin gave credence to the dinosaur-to bird theory -</p>
<blockquote><p>Even the wide interval between birds and reptiles has been shown by [Huxley] to be partially bridged over in the most unexpected manner, by the ostrich and extinct <em>Archeopteryx.</em></p></blockquote>
<p>In the words of evolutionary biologist <a href="http://bio.unc.edu/people/faculty/feduccia/">Alan Feduccia</a> of the University of North Carolina at Chapel Hill, the <em>Archaeopteryx </em>“may well be the most important natural history specimen in existence … Beyond doubt it is the most widely known and illustrated fossil.”</p>
<p>Analysis of the fine feather details has been central to studying the transitional status of the dinosaur-to-bird theory. The <em>Archaeopteryx</em><em> </em>quickly became recognized one of the most famous fossils ever discovered.</p>
<p>By the late twentieth century, the verdict on the transitional status of <em>Archaeopteryx</em> was settled. Barbara Stahl in <a href="http://www.alibris.com/search/books/qwork/7023474/used/Vertebrate%20History%3A%20Problems%20in%20Evolution"><em>Vertebrate History: Problems in Evolution</em></a> (1974) weighed in –</p>
<blockquote><p>How [birds] arose initially, presumably from reptile scales, defies analysis.</p></blockquote>
<p>Alan Feduccia, writing in the journal <a href="http://www.sciencemag.org/content/203/4384/1021.short"><em>Science</em></a> in 1979 , in the paper entitled “Feathers of the Archaeopteryx: Asymmetric Vanes Indicate Aerodynamic Function,” likewise have concluded that the feather was “essentially like those of modern birds” and not a transitional form of the feather.</p>
<p><a href="http://en.wikipedia.org/wiki/John_Ostrom">John Ostrom</a> in 1979 published a paper in the <em><a href="http://www.americanscientist.org/">American Scientist</a>,</em><em> </em>concluding that not only is the <em>Archaeopteryx</em><em> </em>not a missing link, but that “No fossil evidence exists of any pro-avis. It is purely hypothetical.”</p>
<p>Harvard professor, known as Darwin’s 20<sup>st</sup>-century bulldog, <a href="http://www.achievement.org/autodoc/page/may1bio-1">Ernest Mayr</a> in 1982, even began to weigh in with caution, backpedaling by calling the <em>Archaeopteryx</em><em> </em>discovery: “the almost perfect link between reptiles and birds.”</p>
<p>Paleontologist <a href="http://en.wikipedia.org/wiki/Larry_Martin">Larry Martin</a> of the University of Kansas declared in 1985 that the “<em>Archaeopteryx</em><em> </em>is not ancestral of any group of modern birds.”</p>
<p>At the International <a href="http://en.wikipedia.org/wiki/Archaeopteryx"><em>Archaeopteryx </em>Conference </a>in 1985, <a href="http://www.icr.org/article/321/">Peter Dodson </a>concluded that the <em>Archaeopteryx</em><em> </em>was a bird capable of flight and published his conclusion in the <em><a href="http://www.vertpaleo.org/JVP/1742.htm">Journal of Vertebrate Paleontology</a>: </em>“The general credo runs as follows:<em> Archaeopteryx</em> was a bird that could fly” – not a transitional dinosaur-to-bird transitional link.</p>
<p><a href="http://en.wikipedia.org/wiki/Robert_L._Carroll">Robert L. Carroll</a>, professor of biology at McGill University, in 1997 concluded, “The geometry of the flight feathers of <em>Archaeopteryx</em><em> </em>is identical with that of modern flying birds, whereas non-flying birds have symmetrical feathers. The way in which the feathers are arranged on the wing also falls within the range of modern birds.”</p>
<p><a href="http://en.wikipedia.org/wiki/Henry_Gee">Henry Gee</a>, the chief science writer for <em>Nature</em><em>, </em>wrote in 1999 that the missing link status of the <em>Archaeopteryx</em><em> </em>is only an illusion; a “once upon a time” story.</p>
<p>So what is the truth about <em>Archaeopteryx</em>?<em> </em><a href="http://en.wikipedia.org/wiki/Colin_Patterson_(biologist)">Colin Patterso</a>n, senior paleontologist at the British Museum of Natural History, may have summed it up best in a letter to Luther Sunderland on April 10, 1979, writing, “such stories are not a part of science<em>.</em>”</p>
<p>Since the <em>Archaeopteryx</em> discovery in 1860, evolutionists have continued to flounder for feathers in the fossil record long after the evidence has been weighed.  No small wonder that WIKIPEDIA opened the discussion of the Origin of Birds with “The origin of birds is a contentious and central topic within <a title="Evolutionary biology" href="http://en.wikipedia.org/wiki/Evolutionary_biology">evolutionary biology</a>.”</p>
<p>Evolution was once a theory in crisis with speculative evidence, now evolution is in crisis without scientific evidence.</p>
<p>The evolution industry continues with an addiction to old speculations, like the <em>Archaeopteryx, </em>long known to be scientifically bogus.</p>
<p>The<em> Archaeopteryx</em> feather story underscores why evolution is viewed today as only a philosophy, not science.</p>
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		<title>Evolutionary Enigmas, Top 10 Highlights in 2011</title>
		<link>http://www.darwinthenandnow.com/2011/12/evolutionary-enigmas-top-10-highlights-in-2011/</link>
		<comments>http://www.darwinthenandnow.com/2011/12/evolutionary-enigmas-top-10-highlights-in-2011/#comments</comments>
		<pubDate>Sun, 01 Jan 2012 06:57:26 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[evidence]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[theory of evolution]]></category>
		<category><![CDATA[Top 10 highlights of 2011]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3705</guid>
		<description><![CDATA[Since the publication of The Origin of Species by Charles Darwin in 1859, not only is the theory continually challenged by the evidence, confusion rages over the actual theory. The confusion extends into the classroom; the teaching evolution has been a verified failure.]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/12/evolutionary-enigmas-top-10-highlights-in-2011/darwin-papers-2/" rel="attachment wp-att-3733"><img class="alignleft  wp-image-3733" title="Darwin Papers" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/12/Darwin-Papers1-300x223.jpg" alt="" width="180" height="134" /></a>Since the publication of <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species</em></a> by <a href="http://darwin-online.org.uk/">Charles Darwin</a> in 1859, not only is the theory continually challenged by the evidence, confusion rages over the actual theory. The confusion extends into the classroom; the teaching evolution has been a verified failure.</p>
<p>These are my top 10 highlights in 2011 presented on Darwin, Then and Now during the year with links to the original article. <span id="more-3705"></span></p>
<ul>
<li><a href="http://www.darwinthenandnow.com/2011/01/dawn-of-the-deed/">Dawn of the Deed.</a> Australian paleontologist, <a href="http://en.wikipedia.org/wiki/John_A._Long">John A. Long</a> article entitled “<a href="http://www.nature.com/scientificamerican/journal/v304/n1/full/scientificamerican0111-34.html">Dawn of the Deed</a>”, published in the January 2011 issue of <em><a href="../2011/01/dawn-of-the-deed/Scientific%20America,">Scientific America</a>,</em><em> </em>new fish fossils inexplicably demonstrate sudden appearance of internal fertilization, rather than external fertilization of eggs−an evolution enigma.</li>
</ul>
<ul>
<li><a href="http://www.darwinthenandnow.com/2011/03/collins-%e2%80%98junk-dna%e2%80%99-toss/">Collins “Junk DNA” Toss</a>. Francis Collins in <em>Language of Life</em> contradicts his “junk DNA” evolutionary theory in <em>Language of God</em>, stating: “The discoveries of the past decade, little known to most of the public, have completely overturned much of what used to be taught in high school biology. If you thought the DNA molecule comprised thousands of genes but far more “junk DNA”, think again.</li>
</ul>
<ul>
<li><a title="Permanent Link to Breivik, a Darwinist" href="../2011/07/breivik-a-darwinist/">Breivik, a Darwinist</a>. After listing <a href="http://darwin-online.org.uk/contents.html#origin"><em>The</em> <em>Origin of Species</em></a> by <a href="http://darwin-online.org.uk/">Charles Darwin</a> as one of his most “important” books, Norwegian Anders Behring Breivik, proceeded to take natural selection in his own hands by bombing of government buildings in <a title="Oslo" href="http://en.wikipedia.org/wiki/Oslo">Oslo</a>, causing eight deaths, and a <a title="Mass shooting" href="http://en.wikipedia.org/wiki/Mass_shooting">mass shooting</a> at a camp of the <a title="Workers' Youth League (Norway)" href="http://en.wikipedia.org/wiki/Workers%27_Youth_League_%28Norway%29">Workers’ Youth League (AUF)</a> of the <a title="Labour Party (Norway)" href="http://en.wikipedia.org/wiki/Labour_Party_%28Norway%29">Labour Party</a> on the island of <a title="Utøya" href="http://en.wikipedia.org/wiki/Ut%C3%B8ya">Utøya</a>, where he killed 69 people</li>
</ul>
<ul>
<li><a title="Permanent Link to Evolution, a Classroom Failure?" href="../2011/08/evolution-a-classroom-failure/">Evolution, a Classroom Failure?</a> In a <em>New York</em> <em>Times</em> article “<a href="http://www.nytimes.com/2011/02/08/science/08creationism.html?_r=1&amp;ref=us">On Evolution, Biology Teachers Stray From Lesson Plan,</a>” free-lance writer <a href="https://www.spj.org/fdb-detail.asp?cmd=&amp;ref=408">Nicholas Bakalar</a> notes “that only 28 percent of biology teachers consistently follow the recommendations of the <a title="More articles about National Research Council" href="http://topics.nytimes.com/top/reference/timestopics/organizations/n/national_research_council/index.html?inline=nyt-org">National Research Council</a> to describe straightforwardly the evidence for evolution and explain the ways in which it is a unifying theme in all of biology.” The failure of evolutionary scientists to develop a comprehensive theory of evolution over the past 150 years continues as the root of the evolution industry frustration.</li>
</ul>
<ul>
<li><a title="Permanent Link to DNA Fails to Resolve Fossil Record Gaps" href="../2011/09/dna-fails-to-resolve-fossil-record-gaps/">DNA Fails to Resolve Fossil Record Gaps</a>. As <a href="http://cc.bingj.com/cache.aspx?q=Evan+Lerner+&amp;d=4977674116728693&amp;mkt=en-US&amp;setlang=en-US&amp;w=db582824,138964eb">Evan Lerner</a>, the Science News Officer at the <a href="http://www.upenn.edu/">University of Pennsylvania</a> explains, the “Cataloging the diversity of life on Earth is challenging enough, but when scientists attempt to draw a phylogeny — the branching family tree of a group of species over their evolutionary history — the challenge goes from merely difficult to potentially impossible.”</li>
</ul>
<ul>
<li><a title="Permanent Link to Karabo Anti-Science Rhetoric" href="../2011/09/karabo-anti-science-rhetoric/">Karabo Anti-Science Rhetoric</a>. <a href="http://en.wikipedia.org/wiki/Donald_C._Johanson">Donald Johanson</a> paleoanthropologist at Arizona State University and founder of the Institute of Human Origins at the University of California, Berkley, commented on the latest<em> <a href="http://en.wikipedia.org/wiki/Australopithecus_sediba">Australopithecus sediba</a> </em><em>[Karabo] finding in South Africa, an alleged human ancestor: “The oldest </em><em>Homo</em> specimens are scrappy and enigmatic, leaving researchers unsure about the evolutionary steps between the australopithecines and Homo. … The transition to Homo continues to be almost totally confusing.”</li>
</ul>
<ul>
<li><a title="Permanent Link to Neanderthal, Discovery Erodes Differences" href="../2011/10/neanderthal-discovery-erodes-differences/">Neanderthal, Discovery Erodes Differences</a>. <a href="../2010/05/darwin-dna-and-neanderthal/">John Hawks</a>, assistant professor of anthropology at the University of Wisconsin, based on newly discovered genetic evidence told <em>BBC News </em>that “They’re us. We’re them.” Since the genetic evidence demonstrates the Neanderthal interbreed with humans, the Neanderthals and humans are one species−not a human ancestor. <a href="http://www.hhmi.org/research/investigators/hannon_bio.html" target="_blank">Gregory Hannon</a> of Cold Spring Harbor Laboratory in Laurel Hollow in New York concluded that the “publication of the full Neanderthal genome is a watershed event, a major historical achievement.”</li>
</ul>
<ul>
<li><a title="Permanent Link to Essential Elements of Darwin’s Theory" href="../2011/10/essential-elements-of-darwins-theory/">Essential Elements of Darwin’s Theory</a>. In an article published in <a href="http://onlinelibrary.wiley.com/journal/10.1002/%28ISSN%291521-1878"><em>BioEssays</em></a> (2011) entitled “<a href="http://onlinelibrary.wiley.com/doi/10.1002/bies.201000142/full%20">Why is it so difficult to accept Darwin’s theory of evolution?</a>”<a href="http://www.unil.ch/dee/page53292_en.html"> Jacques Dubochet</a>, professor of Ecology and Evolution at the <a href="http://www.unil.ch/index.html">University of Lausanne</a>, Switzerland, was amazed to discover that less than 20% of attendees to a celebration of Darwin’s 200th birthday could “[w]rite down in a few words, the essential elements of Darwin’s theory of evolution”.</li>
</ul>
<ul>
<li><a title="Permanent Link to Ancient Eel Defies Evolution" href="../2011/11/ancient-eel-defies-evolution/">Ancient Eel Defies Evolution</a>. The scientific report of the finding, published in the journal <em><a href="http://rspb.royalsocietypublishing.org/">Proceedings of the Royal Society</a> </em>on-line in August headed by G. David Johnson of the Smithsonian Institute, was entitled <a href="http://rspb.royalsocietypublishing.org/content/early/2011/09/16/rspb.2011.1289.full"><em>A ‘living fossil’ eel (Anguilliformes: Protanguillidae, fam. nov.) from an undersea cave in Palau</em></a>. The comparative morphology and genetic report notes the problem: “The analysis they have performed using morphology and genetics is brilliant and invites as many questions about eel evolution as it solves.”</li>
</ul>
<ul>
<li><a title="Permanent Link to Anomalocaris, a Freak of Evolution" href="../2011/12/anomalocaris-a-freak-of-evolution/">Anomalocaris, a Freak of Evolution</a>. A team of scientists from Australia and Spain lead by <a href="http://www.nature.com/nature/journal/v480/n7376/full/nature10689.html#auth-1">John R. Paterson</a>, a paleontologist at the University of New England in Australia, extended even further Darwin’s dilemma in examining the <em>Anomalocaris</em>: “<em>Anomalocaris</em> is the stuff of nightmares”−a nightmare for the evolution industry since <em>Anomalocaris</em> appeared in Cambrian Explosion then disappeared suddenly. The sudden appearance contradicts the basic premises of evolution.</li>
</ul>
<p>Evolution was once a theory in crisis, now evolution is in crisis without a theory. Scientific evidence from 2011 further supports the contention that evolution only exists as a philosophy.</p>
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		<title>Paleoanthropology, a Legacy of Contention</title>
		<link>http://www.darwinthenandnow.com/2011/12/paleoanthropology-a-legacy-of-contention/</link>
		<comments>http://www.darwinthenandnow.com/2011/12/paleoanthropology-a-legacy-of-contention/#comments</comments>
		<pubDate>Mon, 19 Dec 2011 01:33:03 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[What Darwin Said]]></category>
		<category><![CDATA[What Scientists Say]]></category>
		<category><![CDATA[apes]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[chimpazees]]></category>
		<category><![CDATA[fossil record]]></category>
		<category><![CDATA[human evolution]]></category>
		<category><![CDATA[Louis Leaky]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[Paleoanthropology]]></category>
		<category><![CDATA[The Descent of Man]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3685</guid>
		<description><![CDATA[More than 150 years ago, Darwin was on target when he said “it is useless to speculate on this subject”. Since then, paleoanthropological perspectives on presumed evolutionary origin of humans has been laced with a legacy of contention fueled only by philosophy−not science.]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/12/paleoanthropology-a-legacy-of-contention/leaky-louis-2/" rel="attachment wp-att-3690"><img class="alignleft size-medium wp-image-3690" title="Leaky, Louis" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/12/Leaky-Louis1-232x300.jpg" alt="" width="139" height="180" /></a><a href="http://en.wikipedia.org/wiki/Paleoanthropology">Paleoanthropology</a>, the study of human origins, is unquestionably one of today’s most contentious topics with the evolution industry. <a href="http://darwin-online.org.uk/">Charles Darwin</a> in <a href="http://darwin-online.org.uk/contents.html#descent"><em>The</em> <em>Descent of Man</em></a> only tentatively suggested that humans may have originated from an ancestor on the continent of Africa.</p>
<p>&#8220;On the Birthplace and Antiquity of Man… it is somewhat more probable that our early progenitors lived on the African continent than elsewhere. But it is useless to speculate on this subject.&#8221; Charles Darwin, 1871</p>
<p>On the one hand, speculating on the subject of human origins, was “useless” yet in <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species</em></a>, Darwin countered this argument by noting that “We should always look for forms intermediate between each species and a common but unknown progenitor.” Over the past 150 years, then, in the midst of this confusion, evolutionists have continued to look for the intermediate species leading to humans. <span id="more-3685"></span></p>
<p>With new fossils are continually being found throughout Africa, Asia, and Europe, however, resolving any presumed evolutionary theory on the origins of humans continues to reinforce the long recognized reputation of the evolution industry−constant revision and contention.</p>
<p>Amazingly, the world of paleoanthropology since the publication of <em>The Origin of Species</em> has become a legacy of conflicting personalities and cliquish scientific groups. Some ideas, particularly when they are backed by arguments from authoritative figures in the industry, continue to persist long after they have been proven to be untenable.</p>
<p>In the mid-twentieth century, the evolution debate as to when and where Darwin’s intermediate transitional links gave rise to modern humans diverged from the other great apes became mired in philosophical perspectives−not science.</p>
<p>In particular, one <a href="http://en.wikipedia.org/wiki/Archaeology">archeologist</a> whose name is synonymous with paleoanthropology, <a href="http://en.wikipedia.org/wiki/Louis_Seymour_Bazett_Leakey">Louis Leaky</a>, was perhaps one of the greatest perpetrators. While Darwin suggested that humans originated from Africa, by the early twentieth century many European scientists were beginning to be convinced otherwise.</p>
<p>In 1912, <a href="http://en.wikipedia.org/wiki/Charles_Dawson">Charles Dawson</a> presumably discovered a fossil from a gravel pit in the town of Piltdown in <a href="http://en.wikipedia.org/wiki/East_Sussex">East Sussex</a>, England. The new “fossil discovery” was given the named <em>Eoanthropus dawson, now </em>more commonly known as the <a href="http://www.darwinthenandnow.com/2011/05/the-origin-of-man-mystery/">Piltdown man</a>. In 1913, the Piltdown man was then placed on exhibit in the <a href="http://en.wikipedia.org/wiki/British_Museum_of_Natural_History">British Museum of Natural History</a> as fossil for the evolution of humans, even though undermining Darwin’s tenuous <a href="http://en.wikipedia.org/wiki/Human_evolution">out-of-Africa</a> theory.</p>
<p>British scientists, such as Sir <a href="http://en.wikipedia.org/wiki/Arthur_Keith">Arthur Keith</a>, anthropologist and fellow of the <a href="http://www.rcseng.ac.uk/">Royal College of Surgeons</a>, were so convinced that humans originated in Britain that fossils found in other areas were discredited, especially the South African fossils identified by <a href="http://en.wikipedia.org/wiki/Raymond_Dart">Raymond Dart </a>in 1925 named <em><a href="http://en.wikipedia.org/wiki/Australopithecus_africanus">Australopithecus africanus</a>. </em>Keith considered Dart’s find, also known by the nickname the <a href="http://en.wikipedia.org/wiki/Taung_Child">Taung Child</a>, as another unimportant species of extinct ape.</p>
<p>In 1938, at the <a href="http://en.wikipedia.org/wiki/Barkham">Barkham Manor</a> in Piltdown, Sir Arthur Keith unveiled a memorial to mark the site where Piltdown man was discovered by Charles Dawson. Sir Arthur finished his speech saying:</p>
<blockquote><p>So long as man is interested in his long past history, in the vicissitudes which our early forerunners passed through, and the varying fare which overtook them, the name of Charles Dawson is certain of remembrance.</p></blockquote>
<p><a href="http://profleeberger.com/">Lee Berger</a>, paleontologist from the University of Witwatersrand, suggests that Keith’s philosophy, not science, was the source of his dismissal of the Taung Child.  Unfortunately, over time, as Dart’s colleague Robert Broom began to find more fossil specimens in South Africa, Keith was forced to re-evaluate the Taung Child and his out-of-Europe model of evolution. Then, finally, after decades of display in the museum, in November 1953 the British Museum removed the Piltdown man exhibition because the exhibit was nothing more than an elaborate <a href="http://skepdic.com/piltdown.html">hoax</a>. The Piltdown man was simply a fraudulent construction of a skull of a man and the jaw of an orangutan.</p>
<p>Nearly a decade later in 1934, a little known American paleontologist from <a href="http://www.yale.edu/">Yale University</a>, <a href="http://en.wikipedia.org/wiki/Sivapithecus">G. Edward Lewis</a>, published a paper describing a number of fossil ape species he had discovered in the Siwalik Hills of northern India. Among these apes was a species he named <a href="http://en.wikipedia.org/wiki/Sivapithecus#Ramapithecus"><em>Ramapithecus brevirostris</em></a>. In 1960, Elwyn Simons pieced together more jawbone fragments and announced the fossils as evidence for the evolutionary origin of humans from ape-like animals.</p>
<p>This out-of-India theory ran in opposition to the more popular out-of-Africa model of human evolution theory espoused by paleoanthropologists in the early 1960s lead by <a href="http://en.wikipedia.org/wiki/Louis_Seymour_Bazett_Leakey">Louis Leaky</a>. In particular, Leaky argued that the series of fossil his team discovered in east Africa later named <a href="http://en.wikipedia.org/wiki/Kenyapithecus"><em>Kenyapithecus africanus</em> </a>was the evolutionary origin of humans.</p>
<p>Even though Simons’ fragmentary jaw of <em>Ramapithecus</em> was hardly a match for Leaky’s <em>Kenyapithecus</em>, the <em>Kenyapithecus</em> was never been too far out of the woods. <em>Ramapithecus </em>had supporters. During the 1950’s, the renowned paleoanthropologist <a href="http://en.wikipedia.org/wiki/Wilfrid_Le_Gros_Clark">Wilfrid Le Gros Clark</a>, who along with<a href="http://www.sciencedaily.com/books/t/0198607806-the_piltdown_forgery.htm"> Joseph Weiner</a> and <a href="http://www.sciencedaily.com/books/t/0198607806-the_piltdown_forgery.htm">Kenneth Oakley</a> who had exposed the British Museum Piltdown man fraud, advanced the argument in support of <em>Ramapithecus</em> as the more likely evolutionary origin of humans based on dental arcade.</p>
<p>While the dental arcade of <em>Ramapithecus</em> was V-shaped, similar to humans, by contrast the <em>Kenyapithecus</em> the dental arcade was U-shaped.</p>
<p>During the mid-twentieth century, the Simons <em>Ramapithecus</em> camp versus Leaky <em>Kenyapithecus</em> camp debate raged. Leaky was stuck on the out-of-Africa model largely from Darwin’s vague endorsement of the out-of-Africa model.</p>
<p>Although these two hypotheses were in direct opposition to each other, they were linked by a central anthropocentric principle. Both believed the apes were the evolutionary origins of humans. Perhaps because Leaky followed Darwin’s suggestion, he tyrannically gained the most support.</p>
<p>When confronted with scientific evidence opposing the theory, Leaky was known to attack the individual instead of the evidence. This is best exemplified by an event that transpired at an anthropological conference in Chicago in 1965. David Pilbeam was giving a presentation in which he was attempting to argue that <em>Kenyapithecus africanus</em> was actually a member of the previously identified <em>Dryopithecus nyanzae</em> species. This incident is recounted in <a href="http://gillianmackenzieagency.com/books/authors/48">Virgina Morell</a>’s <em><a href="http://books.simonandschuster.com/ANCESTRAL-PASSIONS/Virginia-Morell/9780684824703">Ancestral Passions: the Leaky family and the quest for humankind’s beginnings</a> </em>(1996: 291):</p>
<blockquote><p>At an anthropological conference in 1965, [Louis Leaky] jumped up and shouted at David Pilbeam, who was giving a presentation, to sit down and shut up… Terrified and appalled, Pilbeam looked around the room for someone to come to his defense. But no one – not even Pilbeam’s thesis advisor or the conference chairman– spoke up.</p></blockquote>
<p>With chaos and contention abounding in the realms of paleontology, evolutionary scientist focused on evidence from biochemistry and genetics.</p>
<p>In the early 1960s, Morris Goodman, a pioneering biochemist at Wayne State University, caused even greater controversy after discovering that human blood proteins were more similar to chimpanzee and gorilla blood proteins than to apes, like Simons’ <em>Ramapithecus</em> or Leaky’s <em>Kenyapithecus</em>.</p>
<p>From this new biochemistry controversy, anthropologist Sherwood Washburn of Harvard University and Vincent Sarich, biochemist of the University of California, Berkley, suggested that the chimpanzee was evolutionary intermediate species leading to the origin of man, not Simons’ <em>Ramapithecus</em> nor Leaky’s <em>Kenyapithecus.</em></p>
<p>The battle lines were drawn: Simons against Leaky, and Simon and Leaky against the ranks of Pilbeam, Goodman, Washburn, and Sarich.</p>
<p>The prospects of <em>Ramapithecus</em> as a transitional link to man were finally exhausted in 1982 following a systematic review by anthropologist <a href="http://en.wikipedia.org/wiki/Milford_H._Wolpoff">Milford E. Wolpoff</a> at the University of Michigan. While Simons conceded, Leaky died in 1972 without ever seeing the light.</p>
<p>Amazingly, the remenints of the Leaky saga are still at large, including physical anthropologist <a href="http://en.wikipedia.org/wiki/Jeffrey_H._Schwartz">Jeffery Schwartz</a> of the <a href="http://en.wikipedia.org/wiki/University_of_Pittsburgh">University of Pittsburgh</a> and president of the <a href="http://www.worldacademy.org/">World Academy of Art and Science</a> (WAAS).</p>
<p>More than 150 years ago, Darwin was on target when he said “it is useless to speculate on this subject”. Since then, paleoanthropological perspectives on presumed evolutionary origin of humans has been laced with a legacy of contention fueled only by philosophy−not science.</p>
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		<title>Anomalocaris, a Freak of Evolution</title>
		<link>http://www.darwinthenandnow.com/2011/12/anomalocaris-a-freak-of-evolution/</link>
		<comments>http://www.darwinthenandnow.com/2011/12/anomalocaris-a-freak-of-evolution/#comments</comments>
		<pubDate>Mon, 12 Dec 2011 01:57:09 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[What Darwin Said]]></category>
		<category><![CDATA[What Scientists Say]]></category>
		<category><![CDATA[Anomalocaris]]></category>
		<category><![CDATA[Cambrian Explosion]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[evidence]]></category>
		<category><![CDATA[John Paterson]]></category>
		<category><![CDATA[natural selection]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[theory of evolution]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3662</guid>
		<description><![CDATA[The pristine condition of the Anomalocaris soft tissue, while a freak of evolution, can best be explained by an act of creation that was instantaneously fossilized while still alive during the flood. The empirical evidence from the Anomalocaris highlights why Darwin’s theory is no longer scientifically relevant.]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/12/anomalocaris-a-freak-of-evolution/anomalocaris/" rel="attachment wp-att-3675"><img class="alignleft size-medium wp-image-3675" title="Anomalocaris" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/12/Anomalocaris-300x210.jpg" alt="" width="240" height="168" /></a>“If it could be demonstrated that any complex organ exists which could not possibly have been formed by numerous, successive, slight modifications,” <a href="http://darwin-online.org.uk/">Charles Darwin</a> wrote in <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species</em></a>, “my theory would absolutely break down”.</p>
<p>This week a team of scientists from Australia and Spain lead by <a href="http://www.nature.com/nature/journal/v480/n7376/full/nature10689.html#auth-1">John R. Paterson</a>, a paleontologist at the University of New England in Australia, extended even further Darwin’s dilemma. <span id="more-3662"></span></p>
<p>The paper entitled “Acute vision in the giant Cambrian predator <em>Anomalocaris</em> and the origin of compound eyes” published in the December 8 edition of the journal <em><a href="http://www.nature.com/nature/journal/v480/n7376/abs/nature10689.html">Nature</a>, </em>a <a href="http://www.darwinthenandnow.com/2010/10/nature-the-journal-explains/">vanguard </a>of evolution, amazingly unveiled<em> </em>the advanced and complex nature of the eyes in this arthropod. Unlike any other known counterpart, past or present, this underwater sea creature has bizarrely positioned eyes at the top of two stalks that extend bilaterally from the sides of the head. <em><a href="http://en.wikipedia.org/wiki/Anomalocaris">Anomalocaris</a>,</em> derived from the word anomaly, means abnormal or strange shrimp.</p>
<p>In a prepared statement, Paterson said that the &#8220;<em>Anomalocaris</em> is the stuff of nightmares&#8221;−a nightmare for the evolution industry. The problem is that the bizarre eyes appear in the Cambrian fossil record with no known ancestor−Darwin’s worst nightmare.</p>
<p>Not only is the position and shape of the stalk eyes an evolutionary enigma, so is the advanced nature of this large shrimp-like animal two pear-shaped eyes. According to Paterson’s report, each eye of this 3 to 6 foot long enigma contains at least 16,000 hexagonal lenses far exceeding the number of lenses in most modern groups with vision as keen as the sharpest insect alive today.</p>
<p>Contrary to Darwin’s theory of natural selection, there is no evidence for any simpler pre-Cambrian or Cambrian ancestor. Cambrian fossilized animals were highly complex and sophisticated. Evidence demonstrates that complex morphologies of the<em> Anomalocaris</em> appeared in Cambrian Explosion then disappeared suddenly.</p>
<p>The international team studied the fossil remains from a shale quarry discovered on <a href="http://en.wikipedia.org/wiki/Kangaroo_Island">Kangaroo Island</a>, just off the southern coast of Australia. The shale formation, known as Emu Bay shale, is noted for stunning preservation of soft tissue, like the eyes, as well as skeletal remains. The first <em>Anomalocaris</em> was discovered by <a href="http://en.wikipedia.org/wiki/Charles_Doolittle_Walcott">Charles Dolittle Watcott</a> in 1909 in the famed <a href="http://en.wikipedia.org/wiki/Burgess_Shale">Burgess Shale</a>. Historically, the <em>Anomalocaris</em> had a cosmopolitan distribution in the Cambrian seas. Fossils of <em>Anomalocaris</em> have been discovered in Canada, China, and in Australia.</p>
<p>The discovery and analysis of <em>Anomalocaris</em> eyes &#8220;confirms that it had superb vision to support its predatory lifestyle&#8221;, according to Paterson. “Such lens-rich compound eyes suggest <em>Anomalocaris</em> was a highly visual hunter. Its prey didn’t stand a chance.”</p>
<p><a href="http://patrickhenrypress.info/node/205965">Pete Spotts</a>, staff writer for <a href="http://www.csmonitor.com/"><em>The Christian Science Monitor</em></a>, noted in the <a href="http://www.csmonitor.com/Science/2011/1208/Fossils-show-shrimp-like-superpredator-s-eyes-had-32-000-lenses">article</a> entitled “Jeepers, creepers, where did the Cambrian ocean&#8217;s top predator get those peepers?” the real evolutionary problem with the discovery:  “the presence of these eyes at this stage in the evolution of life on Earth indicates how quickly, in geologic time, novel features can emerge.” Stated nicely, this presents a serious theoretical conundrum for evolution.</p>
<p>“If numerous species, belonging to the same genera or families, have really started into life at once,” according to Darwin, “the fact would be fatal to the theory of evolution through natural selection”. Clearly, the <em>Anomalocaris</em> is scientific evidence contradicting Darwin’s theory of natural selection.</p>
<p>In an interview, <a href="http://www.newscientist.com/article/dn21251-first-top-predator-was-giant-shrimp-with-amazing-eyes.html?DCMP=OTC-rss&amp;nsref=online-news"><em>New Scientist</em> </a>quoted Paterson: “Very few modern animals, particularly arthropods, have eyes as sophisticated as this&#8221;. With at least 16,000 lenses on each eye, “This is a lot,” says Paterson. “The common housefly has only 3,200 and most ants have fewer than 1,000.”</p>
<p><a href="http://www.nature.com/news/an-eye-opening-fossil-1.9586#auth-1">Matt Kaplan</a>, science writer for <em><a href="http://www.nature.com/news/an-eye-opening-fossil-1.9586">Nature News</a> </em>quoted Paterson commenting on the<em> </em>article in the <em>Nature</em> journal entitled “An eye-opening fossil. Ancient predators had vision sharper than modern insects” that while Dragonflies have up to 28,000 lenses in each eye they are “the freaks of the arthropods”.</p>
<p>Not only is the <em>Anomalocaris</em> a freak of arthropods, the <em>Anomalocaris </em>is a freak of evolution. Contrary to Darwin’s theory, the <em>Anomalocaris </em>suddenly appears then disappears in the Cambrian fossil record.  Rather than clarity, the resurrected <em>Anomalocaris</em> has delivered another insurrection within the disorganized ranks of the evolution industry.</p>
<p>Like the <a href="http://www.barnesandnoble.com/w/darwin-then-and-now-richard-william-nelson/1017713585?ean=9780595513758&amp;itm=3&amp;"><em>Archaeopteryx</em></a>, the <em>Anomalocaris</em> highlights why evolution continues to be a theory in crisis. Today, theories of evolution continue only as a philosophy unsupported by scientific evidence. <a href="http://geology.pomona.edu/faculty-and-staff/dr-gaines/">Robert Gaines</a>, palaeobiologist at Pomona College in Claremont, California, who was not involved in the study understates the implications: &#8220;<a href="http://www.nature.com/news/an-eye-opening-fossil-1.9586">This could stir up a debate</a>&#8220;.</p>
<p>The pristine condition of the<em> Anomalocaris</em> soft tissue, a freak of evolution, can best be explained by an act of creation that was instantaneously fossilized while still alive during the flood. The empirical scientific evidence from the <em>Anomalocaris</em> highlights even further why Darwin’s theory is increasingly irrelevant.</p>
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		<title>Christmas with Charles Darwin</title>
		<link>http://www.darwinthenandnow.com/2011/12/christmas-with-charles-darwin/</link>
		<comments>http://www.darwinthenandnow.com/2011/12/christmas-with-charles-darwin/#comments</comments>
		<pubDate>Mon, 05 Dec 2011 01:18:27 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[Who Darwin Was]]></category>
		<category><![CDATA[A Christmas Carol]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[Charles Dickens]]></category>
		<category><![CDATA[Christmas]]></category>
		<category><![CDATA[Origin of Species]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3646</guid>
		<description><![CDATA[Christmas with Charles Darwin was empty of joy, meaning, and purpose for life beyond simply just surviving.  ]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/12/christmas-with-charles-darwin/christmas-tree-ii-2/" rel="attachment wp-att-3650"><img class="alignleft size-medium wp-image-3650" title="Christmas Tree II" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/12/Christmas-Tree-II1-300x258.jpg" alt="" width="194" height="167" /></a><a href="http://en.wikipedia.org/wiki/Christmas">Christmas</a> for <a href="http://darwin-online.org.uk/">Charles Darwin</a> was simply a seasonal holiday, like other civil occasions in the early nineteenth century. By the time Charles was born, <a href="http://en.wikipedia.org/wiki/Unitarianism">Unitarianism</a> in the Darwin family was well established as a long-time generational tradition.</p>
<p>The birth of Charles Darwin in 1809 preceded the publication of <a href="http://en.wikipedia.org/wiki/A_Christmas_Carol"><em>A Christmas Carol</em></a> by <a href="http://www.dickens-literature.com/">Charles Dickens</a> in 1843 that re-popularized the celebration of Christmas, once again In England.</p>
<p>Christmas for a Unitarian in England during the early nineteenth century was as important as the <a href="http://churchofengland.org/">Church of England</a> recognizing <a href="http://en.wikipedia.org/wiki/Ramadan">Ramadan</a>. Christmas had no significance−the birth of <a href="http://en.wikipedia.org/wiki/Jesus">Jesus</a> was not of a virgin. <span id="more-3646"></span></p>
<p>In his autobiography, Charles Darwin only refers to Christmas twice, neither time referring to a joyous, happy, festive, or significant celebration -</p>
<blockquote><p>I did not therefore proceed to Cambridge at the usual time in October, but worked with a private tutor in Shrewsbury and went to Cambridge after the Christmas vacation, early in 1828.</p>
<p>As I had at first come up to Cambridge at Christmas, I was forced to keep two terms after passing my final examination, at the commencement of 1831.</p></blockquote>
<p>Christmas for Darwin was a civil holiday that notably occurred for him just two days before setting sail on the <em>HMS Beagle</em> on December 27, 1831. Darwin wrote probably the most meaningful statement on Christmas in his book, <a href="http://darwin-online.org.uk/contents.html#researches"><em>Journal of Researches</em></a>, also known as <em>The Voyage of the Beagle</em>:</p>
<blockquote><p>Christmas-Day.—In a few more days the fourth year of our absence from England will be completed. Our first Christmas-day was spent at Plymouth; the second at St. Martin&#8217;s Cove, near Cape Horn; the third at Port Desire, in Patagonia; the fourth at anchor in a wild harbour in the peninsula of Tres Montes; this fifth here; and the next, I trust in Providence, will be in England. We attended divine service in the chapel of Pahia; part of the service being read in English, and part in the native language.</p></blockquote>
<p>Darwin’s Christmas-Day statement curiously contains “Providence” and “divine”−two theological terms. Neither of these terms, however, espouses the significance of Christmas. Darwin just wanted to get back to England.</p>
<p>In the more than 15,000 <a href="http://www.darwinproject.ac.uk/">letters</a> known to be written by Darwin, “Christmas” occurs in only 30 letters. None of these letters lend any significance to Christmas. Christmas was simply a civil holiday, then. Eventually, Darwin despised Christmas and Christianity.</p>
<blockquote><p>I can hardly see how anyone ought to wish Christianity to be true… This is a damnable doctrine.</p></blockquote>
<p>As a post-Anglican theology graduate of Christ’s College, Cambridge University, Darwin gradually replaced Christianity with “survival of the fittest” and illustrated the concept with his infamous &#8220;<a href="http://www.amnh.org/exhibitions/darwin/idea/think.php">I Think</a>&#8221; Tree of Life drawing. The words of English poet <a href="http://www.online-literature.com/tennyson/">Alfred Lord Tennyson</a>, “nature red in tooth and claw”, define the essence of Darwinism.</p>
<p>Christmas for Darwin was just another day to work−“survival of the fittest”. On Christmas day in 1844, with <a href="http://darwin-online.org.uk/EmmaDiaries.html">Emma</a> and a house full of children, Darwin wrote a <a href="http://www.darwinproject.ac.uk/entry-803">1,600 word evaluation</a> on the recent work of <a href="http://en.wikipedia.org/wiki/Joseph_Dalton_Hooker">Joseph D Hooker</a>.</p>
<p>The “survival of the fittest” atmosphere in Darwin’s house on Christmas Day differed immeasurably from the joy experienced in Charles Dickens’ <em>Christmas Carol</em>. Dickens grasped the ultimate essence and purpose of life−giving. Evolution is toxic to Christmas joy.</p>
<p>Christmas with Charles Darwin was empty of joy, meaning, and purpose for life beyond simply just surviving.</p>
<p>&#8220;As a man thinks, so is he.&#8221;</p>
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		<title>Lynn Margulis, Controversial Evolutionist Remembered</title>
		<link>http://www.darwinthenandnow.com/2011/11/lynn-margulis-controversial-evolutionist-remembered/</link>
		<comments>http://www.darwinthenandnow.com/2011/11/lynn-margulis-controversial-evolutionist-remembered/#comments</comments>
		<pubDate>Mon, 28 Nov 2011 04:17:40 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[What Darwin Said]]></category>
		<category><![CDATA[What Scientists Say]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[Lynn Magulis]]></category>
		<category><![CDATA[natural selection]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[President Bill Clinton]]></category>
		<category><![CDATA[theory of evolution]]></category>

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		<description><![CDATA[Evolution was once a theory in crisis, now the evolution industry is in crisis without even a theory. Margulis will be remembered.]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/11/lynn-margulis-controversial-evolutionist-remembered/margulis-lynn-xi/" rel="attachment wp-att-3632"><img class="alignleft size-medium wp-image-3632" title="Margulis, Lynn XI" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/11/Margulis-Lynn-XI-300x208.jpg" alt="" width="226" height="162" /></a>In 1996, <a href="http://www.clintonfoundation.org/">President Bill Clinton</a> awarded evolution theorist <a href="http://en.wikipedia.org/wiki/Lynn_Margulis">Lynn Margulis</a> the <a href="http://www.nsf.gov/od/nms/medal.jsp">National Medal of Science Award</a>. Amazingly, in 2008, Margulis was awarded the <a href="http://www.linnean.org/index.php?id=344">Darwin-Wallace Medal</a> by the Linnean Society of London.  Margulis, who died on Tuesday in Amherst, Massachusetts, however, was no friend of the <a href="http://en.wikipedia.org/wiki/Darwinism">Darwinian theory evolution</a>.</p>
<p>At the center of the raging theory of evolution debates, Margulis emerged as a strong critic of Darwin during the late twentieth century. In the words of Margulis, “Darwin’s claim of ‘descent with modification’ as caused by natural selection is a linguistic fallacy”. <span id="more-3627"></span></p>
<p>In an interview with Australian journalist <a href="http://www.amazon.com/Altenberg-16-Expos%C3%A9-Evolution-Industry/dp/1556439245">Suzan Mazur</a>, Margulis poignantly explains her aversion to the Darwinian notion of evolution:</p>
<blockquote><p>Darwin wrote about the Struggle for Life and attributed change to Natural Selection. He made it easy for his contemporaries to think and verbalize Mr. Big Omnipotent God in the Sky up there picking out those He wants to keep. He has been conceived as the The Natural Selector, He throws the others away.</p></blockquote>
<p><a href="http://darwin-online.org.uk/">Charles Darwin</a> in <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species by Means of Natural Selection</em></a>, promoted the theory that <a href="http://en.wikipedia.org/wiki/Natural_selection">natural selection</a> was the driving force of evolution to advance the origin of new species. For Margulis, however, “natural selection is an elimination process”, not creative of life or new species.</p>
<p>Margulis was not even a friend of the neo-Darwinian theory of evolution that developed in the early twentieth century based on the population genetic work of <a href="http://en.wikipedia.org/wiki/J._B._S._Haldane">J.B.S. Haldane</a> and <a href="http://en.wikipedia.org/wiki/Ronald_Fisher">R.A. Fisher</a>, either:</p>
<blockquote><p>The notion is that if we accumulate enough gene change, enough genetic mutations, we explain the passage from one species to another. This is depicted as two branches in a family tree that emerge from one common ancestor to the two descendants. An entire Anglophone academic tradition of purported evolutionary description was developed quantified, computerized based on what I think is a conceptual topological error.</p></blockquote>
<p>In the words of Margulis, “neo-Darwinists are a… religious sect within the sprawling religious persuasion of Anglo-Saxon Biology… Speciation by accumulation of ‘random DNA mutations’ has never been adequately documented.”</p>
<p>“I work in evolutionary biology,” Margulis opined, “but with cells and micro-organisms. Richard Dawkins, John Maynard Smith, George Williams, Richard Lewontin, Niles Eldredge and Stephen Jay Gould all come out of the zoological tradition, which suggests to me that, in the words of our colleague Simon Robson, they deal with a data set some three billion years out of date.”</p>
<p>Margulis highlighted the plague of the modern evolution industry: “Scientists, like anyone else, follow the money flow.”</p>
<p>Margulis proposed to replace the various versions of Darwinian evolution with a more friendly version of evolution based on symbiosis. <a href="http://www.nytimes.com/2011/11/25/science/lynn-margulis-trailblazing-theorist-on-evolution-dies-at-73.html?_r=1">Bruce Weber</a> in the<em> New York Times</em>, explain: “Dr. Margulis argued that a more important mechanism was symbiosis; that is, evolution is a function of organisms that are mutually beneficial growing together to become one and reproducing.”</p>
<p>Margulis’ gentler theory of symbiosis is in sharp contrast to Darwin’s angry “survival of the fittest” theory later coined as “nature red in tooth and claw” by poet <a href="http://www.victorianweb.org/authors/tennyson/tennybio.html">Alfred Lord Tennyson</a>. They were born in the same year−1809.</p>
<p>In the <a href="http://www.scientificamerican.com/subscribe/sem_bing.cfm"><em>Scientific American</em></a> article, “<a title="Permanent Link to R.I.P. Lynn Margulis, Biological Rebel" href="http://blogs.scientificamerican.com/cross-check/2011/11/24/r-i-p-lynn-margulis-biological-rebel/">R.I.P. Lynn Margulis, Biological Rebel</a>”,<strong> </strong>John Horgan noted that “Lynn Margulis was among the most creative challengers of mainstream Darwinian thinking of the late 20<sup>th</sup> century.”</p>
<p>Margulis was not alone. The evolution industry is now composed of a range of evolutionary scientists like Margulis.  <a href="http://sandwalk.blogspot.com/2011/11/new-view-of-evolution.htm">Larry Moran</a>, Professor in the Department of Biochemistry at the University of Toronto, categorizes evolutionists based on three different points of view−the <strong>Standard View</strong>, the <strong>New View</strong>, and the <strong>Radical View</strong>.</p>
<p>In the <strong>Standard View</strong>, the likes of Richard Dawkins, Jerry Coyne, Sean B. Carroll,<em> </em>and Ken Miller continue advocating the traditional basic tenets of Darwinism. The <strong>New View</strong>,<strong> </strong>as supported by Stephen Jay, Michael Lynch, and Eugene Koonin, only retains a basic notion of Darwinian natural selection. The <strong>Radical View</strong>, to which Moran categorizes Margulis, completely abandons Darwin’s theory of evolution. Marc Kirschner, John Gerhart, James Shapiro, Dorion Sagan, Massimo Pigliucci, and Gerd B. Müller are included in Moran’s Radical View category.</p>
<p>Reflecting on the life of Lynn Margulis provides the time evaluate the state of the evolution industry. Moran laments the fact that after 150 years since the publication of <em>The Origin of Species</em>, a unified theory of evolution still continues as only an elusive abstraction.</p>
<p>The problem: “People are always more loyal to their tribal group,” Margulis protested, “than to any other abstract notion of ‘truth’—scientists especially.” Out of fear, tribal theories of evolution reject the truth to maintain tribal loyalty.</p>
<p>With the technology available, the reach of science to discovering the origins and meaning of life has reached a scientific dead-end. The concept of evolution continues only as a philosophy, not as a science.</p>
<p>Evolution was once a theory in crisis, now the evolution industry is in crisis without even a theory. Margulis will be remembered.</p>
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		<title>The Strongest Single Class of Facts</title>
		<link>http://www.darwinthenandnow.com/2011/11/the-strongest-single-class-of-facts/</link>
		<comments>http://www.darwinthenandnow.com/2011/11/the-strongest-single-class-of-facts/#comments</comments>
		<pubDate>Mon, 21 Nov 2011 01:15:10 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[What Darwin Said]]></category>
		<category><![CDATA[What Scientists Say]]></category>
		<category><![CDATA[biogenic law]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[embryology]]></category>
		<category><![CDATA[Ernst Haeckel]]></category>
		<category><![CDATA[ontology recapitulates phylogenic]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[theory of evolution]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3615</guid>
		<description><![CDATA[Contrary to Darwin’s nineteenth century misguided enthusiasm, embryology now stands as one of the “strongest single class of facts” against any theory of evolution.]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/11/the-strongest-single-class-of-facts/web-2/" rel="attachment wp-att-3619"><img class="alignleft size-medium wp-image-3619" title="Web" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/11/Rana-Fusca-Esculents-300x99.jpg" alt="" width="336" height="111" /></a>“[E]mbryology is to me is by far the strongest single class of facts in favor” of my theory of evolution, was the claim of <a href="http://darwin-online.org.uk/">Charles Darwin</a>. The nineteenth century embryological evidence was pivotal for the development of Darwin’s theory of evolution.</p>
<p>Just two months before the release of the first edition of <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species</em></a><em> </em>in September 1859, Darwin wrote to <a href="http://en.wikipedia.org/wiki/Charles_Lyell">Charles Lyell</a>, “Embryology in Chapter VIII is one of my strongest points I think.”</p>
<p>Founded as a field of science by German biologist <a href="http://en.wikipedia.org/wiki/Karl_Ernst_von_Baer">Karl Ernst von Baer</a> (1792–1876), embryology was just an emerging science in the nineteenth century. As the first to discover the mammalian ovum, Baer is now recognized as the founder of <a href="http://en.wikipedia.org/wiki/Embryology#Modern_embryology_research">modern embryology</a>. <span id="more-3615"></span></p>
<p>With the available technologies of the nineteenth century, Baer formulated a set of laws now known as Baer’s Law. According to Baer, the general characteristic of a group to which an embryo belongs develops before special characteristics.  Embryonic changes were thought to be the driving force to produce the final form.</p>
<p>Extending the implications of Baer’s Law, German biologists <a href="http://en.wikipedia.org/wiki/Fritz_M%C3%BCller">Fritz Müller</a> (1821–1897) and <a href="http://en.wikipedia.org/wiki/Ernst_Haeckel">Ernest Haeckel</a> (1834–1919) popularized the controversial “<a href="http://en.wikipedia.org/wiki/Recapitulation_theory">recapitulation theory</a>.” Haeckel was the one who actively promoted that a species’ embryological development (ontogeny) retraces the species’ entire evolutionary development (phylogeny).</p>
<p>Haeckel coined this theory with the now-famous phrase “<a href="http://en.wikipedia.org/wiki/Recapitulation_theory">ontogeny recapitulates phylogeny</a>.” In other words, the sequences of the embryo retrace the steps of evolution. Haeckel’s version of Baer’s Law was called the <a href="http://en.wikipedia.org/wiki/Recapitulation_theory">Biogenic Law</a>. In theory, then, seeing the human embryo grow would be like watching a silent movie of our ancestral history and presumably evolution in action.</p>
<p>Darwin was not an embryologist, and instead relied on the work of others. In <em>The Origin of Species,</em><em> </em>Darwin gave credit for the embryological model of evolution to Haeckel: “Professor Haeckel in his “Generelle Morphologie” and in [other] works has recently brought his great knowledge and abilities to bear on what he calls phylogeny, or the lines of descent of all organic beings. In drawing up the several series he trusts chiefly to embryological characters [to establish evolutionary sequences].”</p>
<p>Eventually, Haeckel’s concepts of embryology became “second to none in importance” to Darwin’s theory. “Thus, as it seems to me,” Darwin wrote in <em>The Origin of Species</em><em>, </em><em>“</em>the leading facts in embryology,…  are second to none in importance.”</p>
<p>In the opening paragraph of the “Development and Embryology” section of <em>The Origin of Species</em><em>, </em>Darwin explains that embryology “is one of the most important subjects in the whole round of natural history.”</p>
<p>With advances in technology, however, Haeckel’s theory eventually did not survive the twentieth century. In 1958, eminent British embryologist <a href="http://en.wikipedia.org/wiki/Gavin_de_Beer">Gavin de Beer</a> published three editions of a book on embryology attacking Haeckel’s “ontogeny recapitulates phylogeny” theory: “Recapitulation…. i.e., the pressing back of adult ancestral stages into early stages of development of descendants, does not take place.”</p>
<p>Pointing to a number of examples known at the time, de Beer was highly critical of the Haeckel’s theory. One of de Beer’s examples was the development of the eye in two closely related species of<a href="http://en.wikipedia.org/wiki/Frogs"> frog</a>, <em>Rana fusca</em> and <em>Rana esculents</em>. (Pictured)</p>
<p>Since the lenses of these frog eyes appear to be structurally similar (homologous), the embryological development of these two species would be expected to be similar based on Haeckel’s theory. But, the evidence fails to support Haeckel’s theory. De Beer explains the common frog example:</p>
<blockquote><p>It was a problem to know why the lens of the vertebrate eye, which develops from the epidermis overlying the optic cup, should develop exactly in the ‘right’ place, and fit into the optic cup so perfectly, until it was discovered that the optic cup is itself an organizer which induces the epidermis to differentiate into a tailor-made lens. At least, this is what it does in the common frog, <em>Rana fusca</em>, in the embryo of which, if the optic cup is cut out, no lens develops at all. But in the closely related edible frog, <em>Rana esculent</em>, the optic cup can be cut out from the embryo, and the lens develops all the same. It cannot be doubted that the lenses of these two species are homologous [similar], yet they differ completely in the mechanism [embryology] by which determines and differentiation are brought about.</p></blockquote>
<p>Evidence from the common frog demonstrates that similar species do not have similar embryological development. De Beer concluded that the “enthusiasm of the German zoologist Ernst Haeckel, however, led to an erroneous and unfortunate exaggeration of the information.” Australian molecular biologist <a href="http://en.wikipedia.org/wiki/Michael_Denton">Michael Denton</a> explains: “homologous [similar] structures are arrived at by different [embryological] routes.” Ontogeny does not recapitulate phylogeny.</p>
<p>Evidence from these two closely species of frog demonstrate that not only is the embryology completely different, the evidence undermines Haeckel’s proposed Biogenic Law upon which formulated the core of Darwin’s theory of evolution.</p>
<p>No wonder <a href="http://en.wikipedia.org/wiki/George_Gaylord_Simpson">George Gaylord Simpson</a> of the American Museum of Natural History was quick to the chase denouncing Haeckel’s Biogenic Law: it “is now established that ontology does not repeat phylogeny.”</p>
<p>German embryologist <a href="http://www.barnesandnoble.com/c/erich-blechschmidt">Erich Blechschmidt</a> of the University of Guttingen regarded Haeckel’s “Great Biogenetic Law” as one of the most egregious errors in the history of biology. In his book <em>The Beginnings of Human Life</em>, no words were minced in repudiating Haeckel’s fraudulent forgeries: “The so-called basic law of biogenetics is wrong. No buts or ifs can mitigate this fact. It is not even a tiny bit correct or correct in a different form. It is totally wrong.”</p>
<p>Amazing, in 1909 Haeckel <a href="http://www.darwinthenandnow.com/2010/12/haeckel-slammed-once-again-max-planck%e2%80%99s-turn/">announced</a> that his embryo drawings in support of evolution were mere fabrications−fraud.</p>
<p>Intuitively, Darwin knew something was wrong. Just two years after the release of the first edition of <em>The Origin of Species</em>, Darwin was absolutely right in stating, “I look at it as absolutely certain that very much in the <em>Origin</em> will be proved to be rubbish.”</p>
<p>Contrary to Darwin’s nineteenth century misguided enthusiasm, embryology now stands as one of the “strongest single class of facts” against any theory of evolution.</p>
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		<title>Ancient Eel Defies Evolution</title>
		<link>http://www.darwinthenandnow.com/2011/11/ancient-eel-defies-evolution/</link>
		<comments>http://www.darwinthenandnow.com/2011/11/ancient-eel-defies-evolution/#comments</comments>
		<pubDate>Mon, 14 Nov 2011 03:30:13 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[What Darwin Said]]></category>
		<category><![CDATA[What Scientists Say]]></category>
		<category><![CDATA[Anguilliformes]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[eel]]></category>
		<category><![CDATA[fossil record]]></category>
		<category><![CDATA[natural selection]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[Protaguillae palau]]></category>
		<category><![CDATA[theory of evolution]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3575</guid>
		<description><![CDATA["We report the discovery of an enigmatic, small eel-like fish from a 35 m-deep fringing-reef cave in the western Pacific Ocean Republic of Palau that exhibits an unusual suite of morphological characters."]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/11/ancient-eel-defies-evolution/protanguilla-palau/" rel="attachment wp-att-3586"><img class="alignleft size-medium wp-image-3586" title="Protanguilla palau" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/11/Protanguilla-palau-300x194.jpg" alt="" width="212" height="137" /></a><a href="http://darwin-online.org.uk/">Charles Darwin</a><strong></strong> proposed a theory that all <a title="Species" href="http://en.wikipedia.org/wiki/Species">species</a> of life have descended over time from <a title="Common descent" href="http://en.wikipedia.org/wiki/Common_descent">common ancestry</a> in <em><a href="http://darwin-online.org.uk/contents.html#origin">The Origin of Species</a> </em>through a process he coined <a title="Natural selection" href="http://en.wikipedia.org/wiki/Natural_selection">natural selection</a>. Since its publication in 1859, this theory of evolution has been one of the most hotly contested theories in the history of science. A recent ancient eel discovery is the latest example of why.</p>
<p>In February of 2009, research diver Jiro Sakaue, descending into a dark fringing reef cave in the Pacific Ocean <a href="http://en.wikipedia.org/wiki/Palau">Republic of Palau</a>, discovered a small unusual <a href="http://en.wikipedia.org/wiki/Eel">eel</a>-like fish. The species of the fish has since been named <em><a href="http://en.wikipedia.org/wiki/Protoanguillidae">Protaguillae palau</a>. </em>Prot(o) means prototype, first, or original, guilla means eel (a shortened form of <em><a href="http://en.wikipedia.org/wiki/Anguilliformes">Anguilliformes</a> -</em> an order of fish<em>)</em> with palau referring to the discovery location. <span id="more-3575"></span></p>
<p>The problem for the theory of evolution centers on the fact that this species has continued to exist even though it is recognized as a prototype &#8211; the first and most primitive form of the species. According to Darwin’s theory of natural selection, though, as the original species begin to evolve, extinction of the “less improved and intermediate forms of life” should follow. Darwin explains in <em>The Origin of Species</em>:</p>
<blockquote><p>We have seen that it is the common, the widely diffused, and widely ranging species, belonging to the larger genera within each class, which vary most; and these tend to transmit to their modified off spring that superiority which now makes them dominant in their own countries. Natural selection, as has just been remarked, leads to divergence of character and to much extinction of the less improved and intermediate forms of life.</p></blockquote>
<p>Darwin’s even infers this concept in the full title of <em>The Origin of Species–The Origin of Species by Means of Natural Selection, or The Preservation of the Favoured Races in the Struggle of Life</em>. Accordingly, the favored races are to be preserved while the “less improved and “intermediate forms of life” are not. Darwin explains:</p>
<blockquote><p>The theory of natural selection is grounded on the belief that each new variety and ultimately each new species, is produced and maintained by having some advantage over those with which it comes into competition; and the consequent extinction of less-favoured forms almost inevitably follows.</p></blockquote>
<p>For Darwin, “extinction and natural selection go hand in hand” and one “must suppose that there is a power, represented by natural selection or the survival of the fittest, always intently watching each slight alteration … until a better is produced, and then the old ones to be all destroyed.” Extinction is an integral aspect of natural selection.</p>
<p>If Darwin&#8217;s theory of natural selection is true, then, the proto-eel should have become extinct, but it didn’t. The evidence for the continued existence of the ancient proto-eel clearly undermines Darwin’s theory of natural selection.</p>
<p>The scientific report of the finding, published in the journal <em><a href="http://rspb.royalsocietypublishing.org/">Proceedings of the Royal Society</a> </em>on-line in August headed by G. David Johnson of the Smithsonian Institute, was entitled <a href="http://rspb.royalsocietypublishing.org/content/early/2011/09/16/rspb.2011.1289.full"><em>A ‘living fossil’ eel (Anguilliformes: Protanguillidae, fam. nov.) from an undersea cave in Palau</em></a>. The comparative morphology and genetic report notes the problem in the opening sentence:</p>
<blockquote><p>We report the discovery of an enigmatic, small eel-like fish from a 35 m-deep fringing-reef cave in the western Pacific Ocean Republic of Palau that exhibits an unusual suite of morphological characters.</p></blockquote>
<p>The discovery is certainly enigmatic for a number of reasons. Johnson notes that it is “even more primitive than the oldest known fossil eels”, yet still in existence. Since evolutionists estimate that the family of eels arrived over 200 million years ago, the proto-eel finding demonstrates evidence for stasis, not evolution.</p>
<p><a href="http://news.discovery.com/animals/eel-living-fossil-110816.html">John McCosker</a>, chair of <a href="http://www.calacademy.org/science/heroes/jmccosker/">Aquatic Biology at the California Academy of Sciences</a>, sums up the evolution enigma:</p>
<blockquote><p>The analysis they have performed using morphology and genetics is brilliant and invites as many questions about eel evolution as it solves.</p></blockquote>
<p>In other words, the eel discovery is a problem for the Darwin&#8217;s theory of natural selection. The scientific evidence from morphology and genetics has created an even greater insurmountable problem for the theory of evolution. What should have become part of the fossil record has been swimming around presumably unchanged for over 200 million years. In other words,<em> Protaguillae palau</em> spontaneously came out of the box functioning in perfection. That&#8217;s not evolution.</p>
<p>With evidence like this, professors Jerry Fodor and Massimo Piattelli-Palmarini in <em>the book <a href="http://www.amazon.com/What-Darwin-Wrong-Jerry-Fodor/dp/0374288798">What Darwin Got Wrong</a></em> have been driven to conclude that “Darwin’s theory of natural selection is fatally flawed. Not only is flawed, even the concept of natural selection is simply an ‘intentional fallacy’.”<strong> </strong></p>
<p><a href="http://en.wikipedia.org/wiki/Michael_Ruse">Michael Ruse</a> agrees, “the truth is that there is virtually nothing today in evolutionary studies that corresponds to the facts of the <em>Origin</em>.” Even <a href="http://en.wikipedia.org/wiki/Jerry_Coyne">Jerry Coyne</a> of Chicago University Evolution and Ecology Department has been driven to conclude:</p>
<blockquote><p>We conclude—unexpectedly—that there is little evidence for the neo-Darwinian view: its theoretical foundations and the experimental evidence supporting it are weak.</p></blockquote>
<p>Reflecting on the significance of this ancient evolution defying eel, is reason to consider the wisdom of <a href="http://marktwainhouse.org/">Mark Twain</a>:</p>
<blockquote><p>Loyalty to petrified opinion never once broke a chain or freed a human soul.</p></blockquote>
<div>
<p>Evolution was once a theory in crisis, now evolution is in crisis without even a theory. As a scientific fact, the &#8220;petrified opinion&#8221; is now dead. The theory of evolution now only exists as a philosophy.</p>
</div>
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		<title>Unlinking Karabo as a Human Ancestor</title>
		<link>http://www.darwinthenandnow.com/2011/11/unlinking-karabo-as-a-human-ancestor/</link>
		<comments>http://www.darwinthenandnow.com/2011/11/unlinking-karabo-as-a-human-ancestor/#comments</comments>
		<pubDate>Mon, 07 Nov 2011 06:07:06 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[evidence]]></category>
		<category><![CDATA[fossil record]]></category>
		<category><![CDATA[Fred Spoor]]></category>
		<category><![CDATA[human evolution]]></category>
		<category><![CDATA[Karabo]]></category>
		<category><![CDATA[Origin of Species]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3564</guid>
		<description><![CDATA[Today, scientists are finding the words of D. V. Ager, past president of the Geological Association, to be even more in vogue: “It must be significant that nearly all the evolutionary stories I learned as a student … have now been ‘debunked.’”]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/11/unlinking-karabo-as-a-human-ancestor/web/" rel="attachment wp-att-3567"><img class="alignleft size-medium wp-image-3567" title="Web" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/11/Spoor-Fred-300x274.jpg" alt="" width="169" height="155" /></a>In a blaze of excitement in September of this year, a recent fossil discovery in South Africa was headlined one of the missing links in the evolutionary ancestry of humans.</p>
<p>National Public Radio (NPR) ran an article entitled “<a href="http://www.npr.org/2011/09/09/140337459/examining-ancient-fossils-for-clues-to-human-origins">Examining Ancient Fossils for Clues to Human Origins</a><em>”. The Wall Street Journa</em>l chimed in with “<a href="http://online.wsj.com/article/SB10001424053111903285704576558382651436242.html">Fossil Trove Sheds Light on a Stage of Evolution</a>”. The <em>Boston Globe</em> speculated with the title “<a href="http://articles.boston.com/2011-09-09/news/30135847_1_australopithecus-sediba-questions-about-human-evolution-human-lineage">Skeleton could be human relative</a>”;<em> TIME</em> with “<a href="http://www.time.com/time/health/article/0,8599,2092438,00.html?iid=pf-main-mostpop1">Rethinking Human Origins: Fossils Reveal a New Ancestor on the Family Tree</a>”. <em>New Scientist</em> ran the article: <a href="http://www.newscientist.com/article/dn20883-south-african-fossils-halfway-between-ape-and-human.html">South African fossils halfway between ape and human</a><span style="text-decoration: underline;">. </span></p>
<p>To name the fossil, a competition was launched in South Africa. Omphemetse Keepile, a 17-year-old student from St. Mary&#8217;s School in Johannesburg. Keepile&#8217;s winning entry was selected from more than 15,000 submissions in a naming competition sponsored by Standard Bank and Palaeontological Scientific (PAST) in association with Wits University and the Department of Science and Technology. The winning name was Karabo that means “answer” in Setswana.</p>
<p>Once the excitement started settling, questions started circling. Does the fossil evidence really point to Karabo as an ancestor to humans? <span id="more-3564"></span></p>
<p>In September, the <em>Los Angeles Times</em> hinted of an issue with the discovery with the title “<a href="http://articles.latimes.com/2011/sep/08/science/la-sci-australopithecus-fossils-20110909">Hominid fossils may shake up the human family tree</a>”. Even the <em>National Geographic</em> response was guarded, weighing in with “<a href="http://news.nationalgeographic.com/news/2011/09/110908-apes-humans-evolution-australopithecus-sediba-lee-berger-science/">Human Ancestor May Put Twist in Origin Story, New Studies Say</a>”.</p>
<p>Paleontologists <a href="http://en.wikipedia.org/wiki/Tim_D._White">Timothy White</a> of the <a href="http://en.wikipedia.org/wiki/University_of_California,_Berkeley">University of California, Berkley</a>, and <a href="http://en.wikipedia.org/wiki/Ronald_J._Clarke">Ronald Clarke</a> of the University of the Witwatersrand’s Institute for Human Evolution in Germany in an accompanying news article published in <em>Science</em> refuted the  claim that <em>A. sediba</em> represents a transitional species on the way up: &#8220;Given its late age and Australopithecus-grade anatomy, it contributes little to the understanding of the origin of genus Homo.&#8221; Picking up on the story, <em>Time</em> simply <a href="http://www.time.com/time/health/article/0,8599,1978726,00.html">reported</a> that “Tim White … believes <em>A. Sediba</em> bears no relationship to modern humans.”</p>
<p>Anthropologist Bernard Wood of George Washington University noted, “Just because it shares a bit of anatomical morphology with <em>Homo</em> does not mean it is<em> Homo</em> or ancestral to Homo.”</p>
<p>Writing in <em>The Telegraph</em> (UK), science writer <a href="http://blogs.telegraph.co.uk/news/author/tomchiversscience/">Tom Chivers</a> entitled his article “<a href="http://blogs.telegraph.co.uk/news/tomchiversscience/100104050/australopithecus-sediba-can-we-stop-calling-it-a-missing-link/"><em>Australopithecus sediba</em>: can we stop calling it a ‘missing link</a>?” concluding “What it is not, however, is a ‘missing link’.”</p>
<p>Within a week of publication, problems with the alleged fossil record gap resolution began to emerge. On top of the new problem list is the estimated dating of Karabo. <a href="http://en.wikipedia.org/wiki/Donald_C._Johanson">Donald Johanson</a> paleoanthropologist at Arizona State University and founder of the Institute of Human Origins at the University of California, Berkley, noted in <a href="http://www.nytimes.com/2011/09/09/science/09fossils.html?_r=2&amp;pagewanted=2"><em>The New York Times</em></a> that the dating “places the origins of <em>Homo</em> firmly in eastern Africa… prior to the dating of <em>A. sediba</em>.” Presuming the dating is correct, then, this means that humans-like species came before Karabo, therefore the Karabo could not be an ancestor to humans.</p>
<p>Surprisingly, <a href="http://www.linkedin.com/pub/amina-khan/9/717/519">Amina Khan</a> of the <a href="http://articles.latimes.com/2011/sep/08/science/la-sci-australopithecus-fossils-20110909"><em>Los Angeles Times</em></a> picked up on the problem: “But the age of the fossils presents a problem. The researchers&#8217; isotopic and magnetic dating showed the fossils were 1.977 million years old, about 300,000 years younger than a <em>Homo habilis</em> fossil that should have been their junior.”</p>
<p>Professor of Human Origins at George Washington University, <a href="http://www.evolutionnews.org/2011/09/australopithecus_sediba_the_hy050831.html">Bernard Wood</a>, concluded that the original reports are &#8220;a watershed in our understanding of human evolution, even if only to demonstrate that things are pretty complex”. Rather than clarifying human origins, Karabo complicates any presumed line of ancestral descent.</p>
<p>Ian Tattersall, <a title="Paleoanthropologist" href="http://en.wikipedia.org/wiki/Paleoanthropologist">paleoanthropologist</a> and a curator at the <a title="American Museum of Natural History" href="http://en.wikipedia.org/wiki/American_Museum_of_Natural_History">American Museum of Natural History</a>, resigned to the fact that the fossil evidence will never show the &#8220;leap to humans&#8221; because it happened &#8220;very suddenly”.</p>
<p>Sometimes, things never change. Eminent evolutionary paleontologist <a href="http://en.wikipedia.org/wiki/Steven_Gould">Steven Gould</a> noted in<em> </em><a href="http://en.wikipedia.org/wiki/The_Panda%27s_Thumb_%28book%29">The Panda’s Thumb</a>: &#8220;The fossil record had caused Darwin more grief than joy.”</p>
<p>News for Karabo got even worse. Later in October, paleontologist Fred Spoor of the Max Planck Institute for Evolutionary Anthropology published a <a href="http://adsabs.harvard.edu/abs/2011Natur.478...44S">critique</a> on the Karabo fossil in the journal <em>Nature. </em></p>
<p>Rejecting the contention that Karabo is a human ancestor, Spoor wrote that the “evidence seems at odds with the idea that <em>A. sediba</em> was involved in the first appearance of Homo… In spite of certain human-like characteristics &#8211; many of which are consistent with tree dwelling &#8211; the overwhelming evidence is that <em>Au. sediba</em> was a type of Australopithecine and thus an extinct ape rather than a human ancestor.” Karabo has now been unlinked as a human ancestor.</p>
<p>After more than 150 years since the publication of <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species</em></a> by Charles Darwin, evidence for human ancestors in the fossil record continues to plague the evolution industry.</p>
<p>Like the <a href="http://www.darwinthenandnow.com/2011/05/the-origin-of-man-mystery/">Piltdown man</a>, ascribing fossils to human ancestry has been tricky and, at times, even blatant fraud. With the technological advantages now available, the evolutionary value of Karabo has been clearly identified within a few weeks rather than years, or even decades. After promoted as evidence for evolution in the British Museum of Natural History in London, it took more than four decades to uncover that the Piltdown man fossil was simply a manufactured fraud sculptured from the skull of a man and a jaw of an orangutan.</p>
<p>Today, scientists are finding the words of <a href="http://www.zoominfo.com/people/Ager_Derek_19783128.aspx">D. V. Ager</a>, past president of the Geological Association, to be even more in vogue: “It must be significant that nearly all the evolutionary stories I learned as a student … have now been ‘debunked.’”</p>
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		<title>Anti-Science Irony</title>
		<link>http://www.darwinthenandnow.com/2011/10/anti-science-irony/</link>
		<comments>http://www.darwinthenandnow.com/2011/10/anti-science-irony/#comments</comments>
		<pubDate>Mon, 31 Oct 2011 00:06:15 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[PopEvo News]]></category>
		<category><![CDATA[What Darwin Said]]></category>
		<category><![CDATA[What Scientists Say]]></category>
		<category><![CDATA[2012 Presidential campaign]]></category>
		<category><![CDATA[Altenberg-16]]></category>
		<category><![CDATA[Anti-Science]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[deductive reasoning]]></category>
		<category><![CDATA[Evolution-The Extended Synthesis]]></category>
		<category><![CDATA[Fox News]]></category>
		<category><![CDATA[Jon Huntsman]]></category>
		<category><![CDATA[natural selection]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[scientific method]]></category>
		<category><![CDATA[theory of evolution]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3526</guid>
		<description><![CDATA[Ironically, the Anti-Science label applies to the sponsors of evolution. By Oxford English Dictionary standards, the Science label only applies to the “Teach the Controversy” sponsors.]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/10/anti-science-irony/anti-science/" rel="attachment wp-att-3532"><img class="alignleft size-medium wp-image-3532" title="Anti-Science" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/10/Anti-Science-300x213.jpg" alt="" width="180" height="128" /></a>Anti-Science, evolution and climate change are now at the center of the 2012 Presidential campaign. The answers to the head-turning question, “Do you believe in evolution?” gets top media attention even though few politicians have biology training beyond Biology 101. Of course, “does life have meaning and purpose?” is the real core of the question.</p>
<p>The use of the term Anti-Science today has evolved to mean anti-evolution and anti-climate change. How candidates manage the “evolution” question will likely leverage an effect on the final vote next year.&#8221; Question like &#8220;Do you believe in evolution&#8221; are now one of the most dreaded types of questions on the political campaign trail. But, what is Anti-Science? As we will see, the history of the Anti-Science is an amazing saga of irony.</p>
<p>At the core of the Anti-Science debate is the definition of Science. The <a title="Oxford English Dictionary" href="http://en.wikipedia.org/wiki/Oxford_English_Dictionary">Oxford English Dictionary</a> says that science is &#8220;a method of procedures that has characterized natural science since the 17th century, consisting in systematic observation, measurement, and experiment, and the formulation, testing, and modification of hypotheses.&#8221; <span id="more-3526"></span></p>
<p>The father of “method of procedures” is the <a href="http://en.wikipedia.org/wiki/Scientific_method">Scientific Method</a> founded by English philosopher <a href="http://en.wikipedia.org/wiki/Francis_Bacon">Francis Bacon</a> (1561-1626). Use of Bacon’s method launched the <a href="http://en.wikipedia.org/wiki/Scientific_Revolution">Scientific Revolution</a> in the late sixteenth century.</p>
<p>Often called the <a title="Baconian method" href="http://en.wikipedia.org/wiki/Baconian_method"><em>Baconian Method</em></a>, or simply the Scientific Method, Bacon replaced deductive reasoning with strict adherence to inductive reasoning for the purpose of discovering natural laws, Bacon’s insistence on establishing a planned procedure marked a new turn for defining the essence of science.</p>
<p>Using Bacon’s method of investigation, the early Scientific Revolution period culminated in 1687with the publication of the <em>Philosophiae Naturalis Principia Mathematica</em> by <a href="http://en.wikipedia.org/wiki/Isaac_Newton">Isaac Newton</a>. Darwin initially followed the footsteps of Newton. In the same way Newton discovered the natural laws of gravity and motion, <a href="http://darwin-online.org.uk/">Charles Darwin</a> was intent on discovering the <a href="http://en.wikipedia.org/wiki/Natural_law">natural laws</a> of evolution.</p>
<p>The Scientific Revolution was center stage in the eighteenth century. <a href="http://en.wikipedia.org/wiki/John_Herschel">John Herschel</a>’s book, <em><a href="http://www.darwinproject.ac.uk/entry-94#mark-94.f2">Preliminary Discourse on the Study of Natural Philosophy</a> (</em>1830), encapsulated the concepts of the scientific method. Darwin read Herschel’s <em>Discourse </em>while at Cambridge. <a href="http://en.wikipedia.org/wiki/Whewell">William Whewell</a>, a professor at the University of Cambridge, supported Herschel’s approach to the scientific method and later published <em>The History of Inductive Sciences</em><em> </em>(1837) and <em>The Philosophy of Inductive Sciences</em><em> </em>(1840).</p>
<p>In the prelude to <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species</em></a>, Darwin quotes from William Whewell and Francis Bacon. Ironically, since even the fossil record failed to support his theory, Darwin was forced to abandon the Scientific Method.  Darwin was painfully aware that the <a href="http://en.wikipedia.org/wiki/Cambrian_Explosion">Cambrian Explosion</a> actually contradicted his theory.</p>
<p>In response to a letter from <a href="http://en.wikipedia.org/wiki/Asa_Gray">Asa Gray</a>, professor of biology at <a href="http://www.harvard.edu/">Harvard University</a>, Darwin declared: “I am quite conscious that my speculations run quite beyond the bounds of true science.&#8221; Darwin was “anti-Science”.</p>
<p>When questioned further by Gray, Darwin confirmed Gray’s suspicions: “What you hint at generally is very, very true: that my work is grievously hypothetical, and large parts are by no means worthy of being called induction.”  Darwin had turned against the use of scientific principles in developing his theory of evolution.  The “Anti-Science” movement was popular in the nineteenth century, sponsored by the emerging influential members of the <a href="http://www.darwinthenandnow.com/2009/07/x-club/">X Club</a>.</p>
<p>Darwin was very concerned about the effect of the Anti-Science approach. Just two weeks before the lease of <em>The Origin of Species</em>, <a href="http://en.wikipedia.org/wiki/Erasmus_Alvey_Darwin">Erasmus Darwin</a>, his brother, consoled him in a letter: “In fact, the <em>a priori</em> reasoning is so entirely satisfactory to me that if the facts [evidence] won’t fit, why so much the worse for the facts, in my feeling<em>.”</em></p>
<p>In the final chapter of <em>The Origin of Species,</em> Darwin actually only lends hedging confidence to his theory of evolution, noting that the “whole volume is one long argument.… We ought to be extremely cautious in saying that any organ or instinct, or any whole structure, could not have arrived at its present state by many graduated steps.”</p>
<p>Ironically, the use of the popular Anti-Science labeling in politics should be applied to Charles Darwin−the founder of modern evolutionary thought.</p>
<p><a href="http://en.wikipedia.org/wiki/Paul_Nurse">Paul Nurse</a>, writing in the September 14 edition of the <a href="http://www.newscientist.com/article/mg21128302.900-stamp-out-antiscience-in-us-politics.html"><em>New Scientist</em></a> in the article “Stamp out anti-science in US politics” said, “Get the science right first, then discuss the political implications.”</p>
<p>The fact is, the evidence for developing a comprehensive theory of evolution is more in a crisis now, than at any time since the turn of the twenty-first century. As the evidence continues to mount, scientists are now abandoning the once central unifying dogma of evolution established during the late twentieth century−the <a href="http://en.wikipedia.org/wiki/Modern_evolutionary_synthesis">Modern Synthesis</a> theory that had replaced Darwin’s theory of evolution.</p>
<p>The <a href="http://www.darwinthenandnow.com/altenberg-summit/">Altenberg Summit</a> in Austria during the summer of 2008 was a turning point for the evolution industry. At the summit, leading evolutionary scientists declared the Modern Synthesis theory of evolution extinct. <a href="http://en.wikipedia.org/wiki/Mutation">Genetic mutations</a> acted on by <a href="http://en.wikipedia.org/wiki/Natural_selection">natural selection</a> are no longer recognized as the <a href="http://en.wikipedia.org/wiki/Natural_law">natural law</a> for biological evolution.</p>
<p>In the wake of the summit, evolutionary scientists are feverishly in the process of exploring theoretical replacements. <a href="http://mitpress.mit.edu/main/home/default.asp"><em>The MIT Press</em></a> book, “<em><a href="http://mitpress.mit.edu/catalog/item/default.asp?ttype=2&amp;tid=12173">Evolution, the Extended Synthesis</a>” </em>(2010) edited by<strong> </strong><a href="http://en.wikipedia.org/wiki/Massimo_Pigliucci">Massimo Pigliucci</a> and <a href="http://homepage.univie.ac.at/gerhard.mueller/">Gerd B Műller</a> presents 16 potential theories from the summit. Yet, none of the potential replacement theories have emerged as a forerunner. Currently, a cohesive theory of evolution simply does not exist.</p>
<p>Political candidates on both sides of the isle should actually be asked the question: “What is the theory of evolution?”</p>
<p>As it stands, evolution is simply a philosophy and not a science based on any known natural law verified by “systematic observation, measurement, and experiment(s)”. Ironically, the theory of evolution in the twenty-first century, as Darwin plainly acknowledged during the nineteenth century, falls into the realm of Anti-Science, not Science.</p>
<p>Presidential candidate, <a href="http://www.jon2012.com/welcome/home.html">Jon Huntsman</a>, highlights the current conundrum. In an interview with <a href="http://www.foxnews.com/on-air/personalities/bret-baier/bio/#s=a-d">Bret Baier</a> on <a href="http://www.foxnews.com/"><em>Fox News</em></a> “Special Report”, <a href=" http://www.foxnews.com/on-air/special-report/2011/10/26/jon-huntsman-race-long-haul#ixzz1c22AsWWh">Huntsman</a> said “When we take a position that isn&#8217;t willing to embrace evolution, when we take a position that basically runs counter to what 98 of 100 climate scientists have said, what the National Academy of Sciences has said about what is causing climate change and man&#8217;s contribution to it, I think we find ourselves on wrong side of science and therefore in a losing position.”</p>
<p>Amazingly, notice that Huntsman had to turn to “climate scientist[s]” to garner a mirage of scientific support for the theory of evolution.  Even the <a href="http://www.nsta.org/">National Science Teachers Association</a>, the vanguard of evolution in public education, takes distance from any particular theory of evolution by concluding: “There is considerable debate about how evolution has taken place.”</p>
<p>Today, evolution is only alive as a philosophy but not as a science. Contrary to Huntsman’s contention, to claim biological evolution as a scientifically proven fact plays into the realm of Anti-Science.</p>
<p>No wonder, <a href="http://www.tc.umn.edu/~aclove/">Alan Love</a> of the University of Minnesota and one of the Altenberg Summit members concluded that “a fully unified view of evolutionary processes may be out of reach.”</p>
<p>Ironically, the Anti-Science label applies to the sponsors of evolution. By Oxford English Dictionary standards, the Science label only applies to the “Teach the Controversy” sponsors.</p>
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		<title>Evolution of Genes</title>
		<link>http://www.darwinthenandnow.com/2011/10/evolution-of-genes/</link>
		<comments>http://www.darwinthenandnow.com/2011/10/evolution-of-genes/#comments</comments>
		<pubDate>Thu, 27 Oct 2011 18:57:25 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[DNA]]></category>
		<category><![CDATA[evolution]]></category>
		<category><![CDATA[genetics]]></category>
		<category><![CDATA[Modern Synthesis]]></category>
		<category><![CDATA[natural selection]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[scientific method]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3475</guid>
		<description><![CDATA[Genes varying at different rates fails is compatible with a mosaic pattern of life, a pattern indistinguishable from a design theory of life. The scientific evidence points to the fact that life is a mosaic, not a pattern of “slight, successive” evolutionary changes forming Darwin’s Tree of Life.]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/10/evolution-of-genes/mosaic-evidence-3/" rel="attachment wp-att-3523"><img class="alignleft size-full wp-image-3523" title="Mosaic Evidence" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/10/Mosaic-Evidence2.jpg" alt="" width="131" height="143" /></a>In <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species</em></a>, <a href="http://darwin-online.org.uk/">Charles Darwin</a> developed his revolutionary theory of “slight, successive” evolutionary changes. During the mid-nineteenth century, however, knowledge about genes and genetics was speculative at best, no less the evolution of genes.</p>
<p>In fact, Darwin abandoned the scientific method and declared that his theory of evolution was based on speculation –</p>
<p>&nbsp;</p>
<blockquote><p>I am quite conscious that my speculations run quite beyond the bounds of true science.</p></blockquote>
<p><span id="more-3475"></span>Darwin ascribed to the popular nineteenth century theory of <a href="http://www.darwinthenandnow.com/2010/09/altenberg-16-the-third-wave/">blending genetics</a> of inheritance in which the new generation was simply an averaging of the previous generations. Blending genetics was debunked by a contemporary of Darwin, an Austrian monk.</p>
<p>Just a few years after the publication of the first edition of <em>The Origin of Species, </em><a href="http://en.wikipedia.org/wiki/Gregor_mendel">Gregor Mendel</a>, now known as the father of modern genetics, using the scientific method published his landmark paper on genetic inheritance. Mendel in studying the genetics of the pea plant discovered that the theory blending inheritance was wrong.</p>
<p>Mendel’s findings were intensely criticized. It was not until the turn of the twentieth century that the significance of Mendel’s findings was appreciated. Mendel was the <a href="http://en.wikipedia.org/wiki/Vincent_van_Gogh">Vincent van Gogh</a> of modern genetics.</p>
<p>Mendel’s laws of genetics eventually became the foundation of the<a href="http://en.wikipedia.org/wiki/Modern_evolutionary_synthesis"> Modern Synthesis</a> theory of evolution developed during the twentieth century. The <a href="http://en.wikipedia.org/wiki/Central_dogma_of_molecular_biology">central dogma</a> of the Modern Synthesis theory is based on an accumulation of <a href="http://en.wikipedia.org/wiki/Mutation">genetic mutations</a> passed on to the next generation through <a href="http://en.wikipedia.org/wiki/Natural_selection">natural selection</a>.</p>
<p>At the core of the theory was Darwin’s concept of “slight, successive” evolutionary changes. The Modern Synthesis was the central unifying theory for the evolution industry during the early twentieth century. The discovery of the <a href="http://en.wikipedia.org/wiki/Dna">DNA molecule</a> structure by <a href="http://en.wikipedia.org/wiki/Francis_Crick">Francis Crick</a> and <a href="http://en.wikipedia.org/wiki/James_D._Watson">James Watson</a> in 1953 sealed a place for the Modern Synthesis theory with a molecular mechanism for evolution.</p>
<p>DNA was discovered to be a <a href="http://en.wikipedia.org/wiki/Double_helix">double helix structure</a> composed of a <a href="http://en.wikipedia.org/wiki/DNA_sequences">sequence of nucleic acids</a>. The sequence was thought to be the information source driving the code of biological life and evolution.</p>
<p>While the technology was not available to study genetic mutational changes, at the time, the hunt was on to discover the evidence for “slight, successive” genetic mutation changes in the sequence of nucleic acids found in the DNA and <a href="http://en.wikipedia.org/wiki/RNA">RNA molecule</a> as evidence for evolution.</p>
<p>This past week, an international team of scientists lead by <a href="http://www2.unil.ch/ci/annuaire/browse/person/cn=David%20Brawand,%20ou=Etudiants,%20o=Universite%20de%20Lausanne,%20c=ch">David Brawand </a>of the Center for Integrative Genomics at the <a href="http://www.unil.ch/central">University of Lausanne</a> in Switzerland published their work in the journal <em><a href="http://www.nature.com/nature/journal/v478/n7369/full/nature10532.html">Natur</a>e</em>. In the paper, “The Evolution of Gene Expression Levels in Mammalian Organs”, reported “the sequencing of polyadenylated RNA from six organs across ten species that represent all major mammalian lineages (placentals, marsupials and monotremes) and birds (the evolutionary outgroup), with the goal of understanding the dynamics of mammalian transcriptome evolution.”</p>
<p>The underlying purpose was of Brawand’s investigation was to demonstrate Darwin’s “slight, successive” changes in gene expression across a mammalian lineages. Amazingly, however, the investigators failed to discover any evidence for the expected progressive “slight, successive” evolutionary changes in gene sequences between mammals.</p>
<p>While the team reported “that the rate of gene expression evolution varies among organs, lineages and chromosomes”, the glaring problem for evolution is the failure to discover a progression of “slight, successive” evolutionary changes in gene sequences between mammals. Genes varying at different rates fails is compatible with a mosaic pattern of life, a pattern indistinguishable from a design theory of life. The scientific evidence points to the fact that life is a mosaic, not a pattern of “slight, successive” evolutionary changes forming Darwin’s Tree of Life.</p>
<p>Reflecting on the deepening theory of evolution crisis, as early as 1998, the distinguished professor of evolution at the <a title="State University of New York at Stony Brook" href="http://en.wikipedia.org/wiki/State_University_of_New_York_at_Stony_Brook">State University of New York at Stony Brook</a>, <a href="http://en.wikipedia.org/wiki/Douglas_J._Futuyma">Douglas Futuyma</a> opined: “Like most scientific theories, evolutionary theory is incomplete in several respects, most conspicuously in that… it lacks a sufficient body of principles for translating between genes and phenotypes.” In other words, the genetics alone cannot not differentiate between species−phenotypes.</p>
<p>In 2005, <a href="http://en.wikipedia.org/wiki/Sean_B._Carroll">Sean B Carroll</a>, Professor of Molecular Biology, Genetics, and Medical Genetics at the <a title="University of Wisconsin–Madison" href="http://en.wikipedia.org/wiki/University_of_Wisconsin%E2%80%93Madison">University of Wisconsin</a> agrees with Futuyma:</p>
<blockquote><p>The<strong> </strong>Modern Synthesis established much of the foundation for how evolutionary biology has been discussed and taught for the past sixty years. However, despite the monikers of ‘Modern’ and ‘Synthesis’, it is incomplete<strong>.</strong></p></blockquote>
<p>As scientific molecular evidence continues to accumulate, the Modern Synthesis theory of evolution is emerging more as a mirage than a mechanism.  In facing the reality, <a href="http://www.philosophy.umn.edu/people/FacultyProfile.php?UID=aclove">Alan Love</a> of the University of Minnesota concluded</p>
<blockquote><p>My account also meshes with the recognition that a fully unified view of evolutionary processes may be out of reach.</p></blockquote>
<p>While the theory of evolution was once in crisis, now the concept of evolution is in crisis without even a theory.</p>
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		<title>Exposé on Mechanism for Steroid Evolution</title>
		<link>http://www.darwinthenandnow.com/2011/10/expose-on-mechanism-for-steroid-evolution/</link>
		<comments>http://www.darwinthenandnow.com/2011/10/expose-on-mechanism-for-steroid-evolution/#comments</comments>
		<pubDate>Sun, 16 Oct 2011 23:18:10 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[What Darwin Said]]></category>
		<category><![CDATA[What Scientists Say]]></category>
		<category><![CDATA[Ann Gauger]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[Doug Axe]]></category>
		<category><![CDATA[evidence]]></category>
		<category><![CDATA[evolution]]></category>
		<category><![CDATA[genetics]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[Sean Carroll]]></category>
		<category><![CDATA[steroid evolution]]></category>
		<category><![CDATA[theory of evolution]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3460</guid>
		<description><![CDATA[The question is what is the chance of converting one functional molecule to another? Assuming that the estimated age of the universe is 13 billion years−that’s 13,000,000,000 (13 followed by 9 zeros), the time required to convert Carroll’s ancestral receptor to a vertebrate glucocorticoid receptor exceeds the time limits of the universe. Carroll, of course, did not consider time limitations. The probable role of chance, contrary to Dawkin’s earlier presumption, far exceeds the time limits of the universe.]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/10/expose-on-mechanism-for-steroid-evolution/carroll-sean-ii-2/" rel="attachment wp-att-3471"><img class="alignleft size-medium wp-image-3471" title="Carroll, Sean II" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/10/Carroll-Sean-II1-300x285.jpg" alt="" width="175" height="153" /></a>In <em><a href="http://darwin-online.org.uk/contents.html#origin">The Origin of Species</a>,</em> <a href="http://darwin-online.org.uk/">Charles Darwin</a> proposed that evolution proceeds by “slight, successive changes”. Although molecular biology was largely unknown by Darwin during the nineteenth century, “slight, successive” molecular changes have become a cornerstone in the study of biological evolution.</p>
<p>Since <a href="http://en.wikipedia.org/wiki/Steroid_hormone">steroid hormones</a> are known to perform sophisticated regulatory functions in microbes to man, the path of steroid evolution has entered center stage in the realm of investigative <a href="http://en.wikipedia.org/wiki/Molecular_biology">molecular biology</a>.</p>
<p>Steroids hormones were first discovered in the mid-twentieth century by American chemist <a title="Edward Calvin Kendall" href="http://en.wikipedia.org/wiki/Edward_Calvin_Kendall">Edward Calvin Kendall</a> while working at the <a title="Mayo Clinic" href="http://en.wikipedia.org/wiki/Mayo_Clinic">Mayo Clinic</a>. In 1950, Kendall and colleague <a title="Philip Showalter Hench" href="http://en.wikipedia.org/wiki/Philip_Showalter_Hench">Philip Hench</a>, along with Swiss chemist <a title="Tadeus Reichstein" href="http://en.wikipedia.org/wiki/Tadeus_Reichstein">Tadeus Reichstein</a> were awarded the <a title="Nobel Prize in Physiology or Medicine" href="http://en.wikipedia.org/wiki/Nobel_Prize_in_Physiology_or_Medicine">Nobel Prize in Physiology or Medicine</a> for &#8220;their discoveries relating to the hormones of the adrenal cortex, their structure and biological effects.&#8221; <span id="more-3460"></span></p>
<p>The action of steroids occurs by attaching to specific receptor sites. Steroids act like a socket wrench on a bolt−a wrench that is only useful when aligned on the right sized bolt.</p>
<p><a href="http://en.wikipedia.org/wiki/Corticosteroid">Corticosteroids</a> are a class of steroids found in <a href="http://en.wikipedia.org/wiki/Vertebrate">vertebrates</a>.  One of the corticosteroid classes are the <a href="http://en.wikipedia.org/wiki/Glucocorticoid">glucocorticoids</a>. Glucocorticoids (glucose + cortex + steroid) are essential for life, acting to regulate and support a range of important <a title="Cardiovascular" href="http://en.wikipedia.org/wiki/Cardiovascular">cardiovascular</a>, <a title="Metabolism" href="http://en.wikipedia.org/wiki/Metabolism">metabolic</a>, <a title="Immunology" href="http://en.wikipedia.org/wiki/Immunology">immunologic</a>, and <a title="Homeostasis" href="http://en.wikipedia.org/wiki/Homeostasis">homeostatic</a> functions.</p>
<p>This past June, evolutionary biologist <a href="http://seanbcarroll.com/">Sean Carroll</a> and colleagues in the journal <a href="http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3116920/?tool=pubmed"><em>PLoS Genetics</em></a> published a paper entitled “Mechanisms for the Evolution of a Derived Function in the Ancestral Glucocorticoid Receptor”.</p>
<p>Using site-directed mutagenesis, X-ray crystallography, and computational analyses of protein stability to recapitulate and determine the effects of historical mutations, Carroll investigated a range of potential pathways for the evolution of ancestral steroid receptors by genetic mutations to the <a href="http://en.wikipedia.org/wiki/Glucocorticoid_receptor">glucocorticoid receptor</a> in vertebrates.</p>
<p>Carroll suggests that the evolution of the vertebrate glucocorticoid receptor from an ancestral receptor type likely required three specific genetic mutations. Surprisingly, two of the mutations, while maintaining function individually, actually inactivates the receptor. The third mutation simply neutralizes the inactivation effect of the two previous mutations.</p>
<p>“The combined effect of these mutations is so strong that a third mutation, apparently neutral in the ancestral background,” Carroll explains, “evolved to buffer their degenerative effects.”</p>
<p>Assuming these two dysfunctional mutation followed by a neutralizing genetic mutation did occur, what is the probability that this series of events occurred by chance alone?</p>
<p>In<strong><em> “</em></strong><a href="http://en.wikipedia.org/wiki/The_Blind_Watchmaker">The Blind Watchmaker: Why the Evidence of Evolution Reveals a Universe without Design</a>”, evolutionary biologist <a href="http://en.wikipedia.org/wiki/Richard_Dawkins">Richard Dawkins</a> contends that evolution proceeds blindly without direction−evolution is like a blind watchmaker. Dawkins wagers on chance.  <a href="http://www.darwinthenandnow.com/darwin-quotations/chance/">Darwin</a> disagrees: “Mere chance, as we may call it, might cause one variety to differ in some character from its parents …, but this alone would never account for so habitual and large a degree of difference as that between the species of the same genus.”</p>
<p>The evidence, however, favors Darwin’s contention−not Dawkins.  <a href="http://biologicinstitute.org/people/">Doug Axe</a>, Director of the <a href="http://biologicinstitute.org/">Biologic Institute</a>, and molecular geneticist <a href="http://biologicinstitute.org/people/">Ann Gauger</a> in the paper “<a href="http://bio-complexity.org/ojs/index.php/main/article/view/BIO-C.2011.1">The Evolutionary Accessibility of New Enzymes Functions: A Case Study from the Biotin Pathway</a>” demonstrated that for the conversion of one functional molecule to another requires a minimum of seven genetic mutations.  Based on a <a href="http://bio-complexity.org/ojs/index.php/main/article/view/BIO-C.2010.4">realistic population genetics model</a>, Axe and Gauger demonstrated that each mutation would require 10<sup>27</sup> years. That’s a ten followed by 27 zeros.</p>
<p>The question is what is the chance of converting one functional molecule to another? Assuming that the estimated <a href="http://en.wikipedia.org/wiki/Age_of_the_universe">age of the universe</a> is 13 billion years−that’s 13,000,000,000 (13 followed by 9 zeros), the time required to convert Carroll’s ancestral receptor to a vertebrate glucocorticoid receptor exceeds the time limits of the universe. Carroll, of course, did not consider time limitations. The probable role of chance, contrary to Dawkin’s earlier presumption, far exceeds the time limits of the universe.</p>
<p>These time constraints on evolution by genetic mutations are just one of the reasons why evolutionary scientists have largely abandoned the <a href="http://en.wikipedia.org/wiki/Modern_evolutionary_synthesis">Modern Synthesis</a> theory of evolution originally developed during the twentieth century following the discovery of the double-helix structure of <a href="http://en.wikipedia.org/wiki/Dna">DNA</a>.</p>
<p>The 2008 Altenberg Summit hosted by <a href="http://www.stonybrook.edu/philosophy/faculty/mpigliucci/">Massimo Pigliucci</a> of Stony Brook University and <a href="http://homepage.univie.ac.at/gerhard.mueller/">Gerd B Műller</a> of University of Vienna. The sixteen evolutionary attendees of the summit, while dismissing the Modern Synthesis, proposed a series of new theoretical frameworks for evolution.</p>
<p>While Carroll’s approach to solving theoretical evolutionary problems was noble, evolution through genetic mutations is no longer the leading theory of evolution. Currently, the problem in evolution circles today is that disbanded Modern Synthesis theory of evolution has not been replaced by another unifying theory of evolution. <em>Evolution, the Extended Synthesis</em><strong> </strong>published by MIT Press discusses alternatives to the Modern Synthesis.</p>
<p>Italian geneticist <a href="http://en.wikipedia.org/wiki/Giuseppe_Sermonti">Giuseppe Sermonti</a> succinctly summed up the problem with evolution: “There never really has been a scientific theory of evolution.”</p>
<p>Currently, a cohesive theory of evolution does not exist. Carroll’s recent experiments further highlights why genetic mutations are no longer considered a viable mechanism for biological evolution.</p>
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		<title>Neanderthal, Discovery Erodes Differences</title>
		<link>http://www.darwinthenandnow.com/2011/10/neanderthal-discovery-erodes-differences/</link>
		<comments>http://www.darwinthenandnow.com/2011/10/neanderthal-discovery-erodes-differences/#comments</comments>
		<pubDate>Wed, 12 Oct 2011 05:33:34 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[What Darwin Said]]></category>
		<category><![CDATA[What Scientists Say]]></category>
		<category><![CDATA[Anthropology]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[Descent of Man]]></category>
		<category><![CDATA[fossil record]]></category>
		<category><![CDATA[genetics]]></category>
		<category><![CDATA[Neanderthal]]></category>
		<category><![CDATA[Origin of Species]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3447</guid>
		<description><![CDATA[These discoveries using previously unknown technologies continue to erode the differences rather than supporting the concept that the Neanderthals are an ancestral transitional link to human.]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/10/neanderthal-discovery-erodes-differences/neanderthal-plant-tool/" rel="attachment wp-att-3452"><img class="alignleft size-medium wp-image-3452" title="Neanderthal Plant Tool" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/10/Neanderthal-Plant-Tool-300x235.jpg" alt="" width="180" height="141" /></a><a href="http://darwin-online.org.uk/">Charles Darwin</a> never mentions the 1856 fossil discovery in the <a href="http://en.wikipedia.org/wiki/Neandertal">Neander Valley</a> limestone quarry located in Germany in <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species</em></a> in 1859 nor in any of the six subsequent editions. Even in <a href="http://darwin-online.org.uk/contents.html#descent"><em>The Descent of Ma</em></a>n, Darwin did not endorse the <a href="http://en.wikipedia.org/wiki/Neanderthal">Neanderthals</a> as a potential ancestral transitional link to humans.</p>
<p>In fact, the discovery was a problem since the Neanderthal skulls are larger than human skulls. Darwin had argued that the advancement of evolution proceeded through “slight, successive changes”.</p>
<p>The Neanderthal fossils created a dilemma for Darwin, how could a larger brain precede a smaller brain? Darwin cautiously noted, that “it must be admitted that some skulls of very high antiquity, such as the famous one of Neanderthal, are well developed and capacious [large]”. For Darwin, the Neanderthal skulls were too large to have preceded humans. <span id="more-3447"></span></p>
<p>As the fossil evidence for the Neanderthals continued to be discovered throughout Europe, the evidence seemed to point to the Neanderthals as a big game hunter transitional species leading to humans. With the goal of discovering our human evolutionary ancestors, the possibility that the Neanderthals represented a previously unknown ethnic group of humans was marginalized within the evolution industry.</p>
<p>During the twentieth century, at stake is whether the <a href="http://www.darwinthenandnow.com/2011/05/the-origin-of-man-mystery/">Neanderthals</a> are a transitional species different from modern humans, or simply a human ethnic group.</p>
<p>Darwin, as we know now, was right to be cautious. Technology is answering the question. Just last year, a team lead by <a href="http://www.darwinthenandnow.com/2010/05/darwin-dna-and-neanderthal/">Svante Pääbo</a> of the Department of Evolutionary Genetics at the Max-Planck Institute for Evolutionary Anthropology in Germany eroded the genetic difference between the Neanderthals and modern humans after publishing the full Neanderthal genome.</p>
<p>Commenting on the findings, <a href="http://www.darwinthenandnow.com/2010/05/darwin-dna-and-neanderthal/">John Hawks</a>, assistant professor of anthropology at the University of Wisconsin, told <em>BBC News </em>that &#8220;They&#8217;re us. We&#8217;re them.”</p>
<p>“[T]he really surprising thing for many of us,” noted Professor Chris Stringer, research leader in human origins at London&#8217;s Natural History Museum, “is the implication that there has been some interbreeding between Neanderthals and modern humans in the past.&#8221; Since different species cannot interbreed, the Neanderthals can no longer be considered a transitional species.</p>
<p><a href="http://www.hhmi.org/research/investigators/hannon_bio.html" target="_blank">Gregory Hannon</a> of Cold Spring Harbor Laboratory in Laurel Hollow in New York concluded that the “publication of the full Neanderthal genome is a watershed event, a major historical achievement.&#8221; Genetic evidence is clear−the Neanderthals are not genetically distinct from modern humans.</p>
<p>This past week, Bruce L. Hardy of Kenyon College in Ohio and Marie-Hélène Moncel of the Muséum National d&#8217;Histoire Naturelle in Paris has further eroded the differences between the Neanderthals and modern Humans using anthropological evidence.</p>
<p>In the journal <em>PLoS ONE</em> this past week, Hardy and Moncel in the article “<a href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0023768">Neanderthal Use of Fish, Mammals, Birds, Starchy Plants and Wood 125-250,000 Years Ago</a>”, further dispels anthropological differences between the Neanderthals and Humans.</p>
<p>Hardy and Moncel dispels the Neanderthal big game hunter myth: the “Neanderthals are most often portrayed as big game hunters who derived the vast majority of their diet from large terrestrial herbivores while birds, fish and plants are seen as relatively unimportant or beyond the capabilities of Neanderthals.”</p>
<p>At the fossil site in Payre, France, after evaluating 182 Neanderthal plant, fish and bird processing tools based in the wear and adhering biological residues on the tools, Hardy and Moncel  concluded that contrary to the once popular big game hunted paradigm, the Neanderthal diet “was quite diverse, including plants, large and small animals, fish, and possibly birds.”</p>
<p>“Neanderthals practiced what has been considered exclusively modern human behavior”,  Hardy and Moncel concluded. In other words, the diet of the Neanderthal is not different from modern Human.</p>
<p>These discoveries using previously unknown technologies continue to erode the differences rather than supporting the concept that the Neanderthals are an ancestral transitional link to human. The evolution industry is now tasked with discovering a better potential ancestral transitional link to humans.</p>
<div>
<p>The fact of evolution is: there is no consensus on what species is will become the next potential transitional link candidate.  Evidence for the Neanderthal as a transitional link to modern Humans has now been eroded to the edge of extinction.</p>
</div>
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		<title>Essential Elements of Darwin&#8217;s Theory</title>
		<link>http://www.darwinthenandnow.com/2011/10/essential-elements-of-darwins-theory/</link>
		<comments>http://www.darwinthenandnow.com/2011/10/essential-elements-of-darwins-theory/#comments</comments>
		<pubDate>Sun, 02 Oct 2011 23:23:27 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[PopEvo News]]></category>
		<category><![CDATA[Altenberg-16]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[Evolution-The Extended Synthesis]]></category>
		<category><![CDATA[Gerd Muller]]></category>
		<category><![CDATA[Jacques Dubochet]]></category>
		<category><![CDATA[James Le Fanu]]></category>
		<category><![CDATA[Massimo Pigliucci]]></category>
		<category><![CDATA[natural selection]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[Rick Perry]]></category>
		<category><![CDATA[theory of evolution]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3427</guid>
		<description><![CDATA[In an article published in BioEssays (2011) entitled “Why is it so difficult to accept Darwin's theory of evolution?” Jacques Dubochet, professor of Ecology and Evolution at the University of Lausanne, Switzerland, was amazed to discover that less than 20% of attendees to a celebration of Darwin's 200th birthday could “[w]rite down in a few words, the essential elements of Darwin's theory of evolution”.]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/10/essential-elements-of-darwins-theory/dubochet-jacques-iv-2/" rel="attachment wp-att-3441"><img class="alignleft size-full wp-image-3441" title="Dubochet, Jacques IV" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/10/Dubochet-Jacques-IV1.jpg" alt="" width="101" height="147" /></a>In the same way <a href="http://en.wikipedia.org/wiki/Isaac_Newton">Isaac Newton</a> discovered the physical laws of motion and gravity, <a href="http://darwin-online.org.uk/">Charles Darwin</a> attempted to discover the natural laws of evolution in <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species</em></a>. <a href="http://en.wikipedia.org/wiki/Natural_selection">Natural selection</a> became Darwin’s proposed natural law, as expressed in the title−<em>The Origin of Species by Means of Natural Selection.</em></p>
<p>Today, Darwin’s theory of evolution is promoted as a “fact” that accepted by “all scientists”. Evolution as a “fact”, not theory, is center stage in the realm of politics. The media hammered presidential candidate <a href="http://www.darwinthenandnow.com/2011/08/2012-campaign-centers-on-evolution/">Rick Perry</a> for stating that evolution is “just a theory”. Ironically, though, the facts of evolution continue to elude even the vast majority of the most educated in Western society.</p>
<p>In an article published in <a href="http://onlinelibrary.wiley.com/journal/10.1002/(ISSN)1521-1878"><em>BioEssays</em></a> (2011) entitled “<a href="http://onlinelibrary.wiley.com/doi/10.1002/bies.201000142/full ">Why is it so difficult to accept Darwin&#8217;s theory of evolution?</a>”<a href="http://www.unil.ch/dee/page53292_en.html"> Jacques Dubochet</a>, professor of Ecology and Evolution at the <a href="http://www.unil.ch/index.html">University of Lausanne</a>, Switzerland, was amazed to discover that less than 20% of attendees to a celebration of Darwin&#8217;s 200th birthday could “[w]rite down in a few words, the essential elements of Darwin&#8217;s theory of evolution”. <span id="more-3427"></span></p>
<p>“Most educated people”, Dubochet concluded, “do not understand Darwin&#8217;s theory of evolution.” Underscoring the reasons against understanding evolution, he “states that life evolves without a goal and in the absence of finality is shocking for most people because it clashes with their idea of the meaning of life.” This is a philosophical problem for evolutionists.</p>
<p>The fact is “most educated people” are not brain dead to the chicken or the egg problem. As Dubochet notes, “how can it [natural selection] account for an eye or a wing since they must first exist before selection can take place?” This is an empirical problem for evolutionists.</p>
<p>“The idea of biological design is so obvious that,” Dubochet laments, “it constantly appears in discussions on biological matters and even in the scientific literature.” The intuitive influence of design in nature is pervasive even within the realm of evolutionary scientists. Intuitively, Dubochet concludes, “[t]he principle of Darwin&#8217;s theory of evolution is much more difficult to grasp”. Evolutionary biologists still intuitively slide into a world of hypocrisy.</p>
<p>The “in biology, nothing makes sense except in the light of the theory of evolution” dogma once espoused by Ukrainian evolutionary biologist, <a href="http://en.wikipedia.org/wiki/Theodosius_Dobzhansky">Theodosius Dobzhansky</a>, in 1942 has now become the sound of discordant rhetoric.</p>
<p><a href="http://www.jameslefanu.com/">James Le Fanu</a>, physician, medical journalist, and author of the award winning <em><a href="http://www.jameslefanu.com/books">The Rise and Fall of Modern Medicine</a>, </em>reminds us in the article “<a href="http://www.evolutionnews.org/2011/09/inconsistent_nature051281.html">Inconsistent Nature: The Enigma of Life&#8217;s Stupendous Prodigality</a>”<strong> </strong>that “[t]he purpose of such inconsistencies, if there is one, must be to remind us that Nature is too profound to be readily accessible to the finite human mind. And while many aspects of the diverse being and ways of life are more or less well described, hardly anything is really understood.”</p>
<p>Dubochet&#8217;s discovery on the educated reflects the actual state of evolution in 2011: a consistent theory of evolution simply does not exist.   This realization has been highlighted by the 2008 <a href="http://www.darwinthenandnow.com/altenberg-summit/">Altenberg Summit</a> coordinated by <a href="http://web.gc.cuny.edu/philosophy/faculty/pigliucci.htm">Massimo Pigliucci </a>of <a href="http://www.stonybrook.edu/">Stony Brook University</a> and<a href="http://homepage.univie.ac.at/gerhard.mueller/"> Gerd B Műller</a> of the <a href="http://www.univie.ac.at/">University of Vienna</a>.</p>
<p>The purpose of the Altenberg Summit was to develop a new comprehensive theory of evolution following the demise of the <a href="http://en.wikipedia.org/wiki/Modern_evolutionary_synthesis">Modern Synthesis</a> theory of evolution once championed by Dobzhansky earlier in the mid-twentieth century.</p>
<p>The sixteen evolutionary scientists attending the summit contributed to the book “<a href="http://mitpress.mit.edu/catalog/item/default.asp?ttype=2&amp;tid=12173">Evolution, the Extended Synthesis</a>” published by<a href="http://mitpress.mit.edu/main/home/default.asp"> The MIT Press</a>. Contrary to the goal of achieving a new single unifying and comprehensive theory of evolution, sixteen different theories of evolution emerged.  In the last chapter of the book, <a href="http://www.tc.umn.edu/~aclove/">Alan C. Love</a> of the <a href="http://www1.umn.edu/twincities/index.html">University of Minnesota</a> concluded “that a fully unified view of evolutionary processes may be out of reach.”</p>
<p>With at least sixteen different popular theories of evolution at play today, the fact that nearly 20% of Dubochet Darwin&#8217;s 200th birthday celebration attendees came close to any single theory registers as a near phenomenon.</p>
<p>In 1975, <a href="http://en.wikipedia.org/wiki/Jacques_Monod">Jacques Monad</a>, an early Modern Synthesis advocate noted that “a curious aspect if the theory of evolution is that everyone thinks he understands it. I mean philosophers, social scientists, and so on. While in fact very few people understand it, actually, as it stands, even as it stood when Darwin expressed it, and even as we now may be able to understand it in biology.”</p>
<p>The words of French geneticist <a href="http://en.wikipedia.org/wiki/Jerome_Lejeune">Jerome Lejeune</a> encapsulates the current theory of evolution and should resolve Dubochet dilemma: “[t]here is no theory of evolution”. Italian geneticist <a href="http://lclane2.net/sermonti.html">Giuseppe Sermonti</a> agrees, “[e]volution is really more of a paradigm or methodology than a theory.”</p>
<p>Evolution is only a “fact” as a philosophy−but, not as a natural law. The scientific basis of evolution has remained unchanged for more than 150 years. Dubochet and evolutionary scientists could regain credibility by stating the essential elements of Darwin&#8217;s own words in a <a href="http://www.darwinproject.ac.uk/entry-2109">letter</a> <a href="http://en.wikipedia.org/wiki/Asa_Gray">Asa Gray</a> in 1857: “I am quite conscious that my speculations run quite beyond the bounds of true science.”</p>
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		<title>DNA Fails to Resolve Fossil Record Gaps</title>
		<link>http://www.darwinthenandnow.com/2011/09/dna-fails-to-resolve-fossil-record-gaps/</link>
		<comments>http://www.darwinthenandnow.com/2011/09/dna-fails-to-resolve-fossil-record-gaps/#comments</comments>
		<pubDate>Sun, 25 Sep 2011 23:08:36 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[What Scientists Say]]></category>
		<category><![CDATA[Altenberg-16]]></category>
		<category><![CDATA[cetaceans]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[DNA]]></category>
		<category><![CDATA[Evan Lerner]]></category>
		<category><![CDATA[Joshua Plotkin]]></category>
		<category><![CDATA[Modern Synthesis]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[theory of evolution]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3403</guid>
		<description><![CDATA[This molecular inference is problematic because it's known to be false. ]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/09/dna-fails-to-resolve-fossil-record-gaps/plotkin-joshua-2/" rel="attachment wp-att-3408"><img class="alignleft size-medium wp-image-3408" title="Plotkin, Joshua" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/09/Plotkin-Joshua1-300x203.jpg" alt="" width="180" height="122" /></a>In <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species</em></a>, <a href="http://darwin-online.org.uk/">Charles Darwin</a> agonized over the gaps in the fossil record. “Why then is not every geological formation and every stratum full of such intermediate links? Geology assuredly does not reveal any such finely graduated organic chain; and this, perhaps,” Darwin pined, “is the most obvious and serious objection which can be urged against my theory.”</p>
<p>To address and justify the “serious objection,” Darwin reasoned that “only a small portion of the surface of the Earth has been geologically explored.” However, in the wake of 150 years of unprecedented paleontological research since the publication of <em>The Origin of Species</em> in 1859, the gaps are even more glaring. <span id="more-3403"></span></p>
<p>As <a href="http://cc.bingj.com/cache.aspx?q=Evan+Lerner+&amp;d=4977674116728693&amp;mkt=en-US&amp;setlang=en-US&amp;w=db582824,138964eb">Evan Lerner</a>, the Science News Officer at the <a href="http://www.upenn.edu/">University of Pennsylvania</a> explains, the “Cataloging the diversity of life on Earth is challenging enough, but when scientists attempt to draw a phylogeny — the branching family tree of a group of species over their evolutionary history — the challenge goes from merely difficult to potentially impossible.”</p>
<p>The significance of the problem cannot be overlooked since the fossil record is the only direct evidence scientists have about the history of life. In lieu of direct evidence, scientists during the twentieth century increasingly turned to investigating indirect evidence for evolution.</p>
<p>Of the types of indirect evidence, “slight, successive” molecular changes between species emerged as a leading candidate to stand-in for the fossil record gaps. Molecular changes from species to species were expected to parallel evolutionary changes in the fossil record.</p>
<p>This past week, a research team at the University of Pennsylvania announced that their molecular results will be published in the <a href="http://www.pnas.org/">Proceedings of the National Academy of Sciences</a> in the paper entitled &#8220;<a href="http://www.pnas.org/content/early/2011/09/15/1102543108.abstract">Reconciling Molecular Phylogenies with the Fossil Record</a>.&#8221;</p>
<p>“We’ve put contemporary molecular approaches on equal footing with classical paleontological approaches,” says University of Pennsylvania researcher, <a href="http://www.bio.upenn.edu/faculty/plotkin/">Joshua B. Plotkin</a>, an associate professor of biology in the <a href="http://www.sas.upenn.edu/">School of Arts and Sciences</a> and the <a href="http://www.cis.upenn.edu/">Department of Computer and Information Science</a> in the <a href="http://www.seas.upenn.edu/">School of Engineering and Applied Science</a>. Plotkin conducted the research along with postdoctoral fellows <a href="http://www.cmapx.polytechnique.fr/~morlon/opportunities.html">Helene Morlon</a> and <a href="http://mathbio.sas.upenn.edu/#">Todd Parsons</a>.</p>
<p>Plotkin and his team developed a new technique for re-tracing the history of species using <a href="http://en.wikipedia.org/wiki/Dna">DNA</a> in <a href="http://en.wikipedia.org/wiki/Cetaceans">cetaceans</a>, a group of species that includes whales, dolphins and porpoises. This DNA reconstructive technique once held prominence in the field of theoretical evolution.</p>
<p>When checked against a group of species that do have a good fossil record, Plotkin’s research team will be reporting that new glaring problems have emerged−DNA evidence cannot account for extinctions. Plotkin explains the problem: &#8220;This molecular inference is problematic because it&#8217;s known to be false. The fossil record clearly shows extinctions and long periods of diversity loss.&#8221;</p>
<p>The disconnection between Darwin’s theory of “slight, successive” evolutionary changes and corresponding genetic changes are now well recognized even within the evolution industry. The once prominent gene-centric theory of evolution, known as the Modern Synthesis theory of evolution rapidly started dissolving earlier in the twenty-first century as a consequence of advances in genomics.</p>
<p>In 2008, evolutionary scientists, <a href="http://en.wikipedia.org/wiki/Massimo_Pigliucci">Massimo Pigliucci</a> of Stony Brook University and <a href="http://homepage.univie.ac.at/gerhard.mueller/publications-papers.html">Gerd B Műller</a> of the University of Vienna hosted the convening of the sixteen greatest minds in evolution for the purpose of constructing a non-gene-centric theory for evolution in Altenberg, Austria. The meeting has since been called the <a href="http://www.darwinthenandnow.com/altenberg-summit/">Altenberg Summit</a>−the Woodstock of Evolution.</p>
<p>According to Pigliucci, “several of these tenets <a href="http://en.wikipedia.org/wiki/Modern_evolutionary_synthesis">[Modern Synthesis</a>] are being challenged as either inaccurate or incomplete… “All of these molecular processes clearly demolish the alleged <a href="http://en.wikipedia.org/wiki/Central_dogma_of_molecular_biology">central dogma</a>.”</p>
<p>“The Modern Synthesis was a great intellectual accomplishment in an important era for evolutionary biology. Viewed today it is neither modern nor much of a synthesis,” according to<a href="http://en.wikipedia.org/wiki/Marc_W._Kirschner"> Marc Kirschner</a> of Harvard University and <a href="http://mcb.berkeley.edu/index.php?option=com_mcbfaculty&amp;name=gerhartj">John C Gerhart</a> of the University of California, Berkley.</p>
<p>Evidence from DNA will fail to address the fossil record gaps. Genetics is no longer considered a driving force in evolutionary.</p>
<p>No small wonder why Italian geneticist <a href="http://en.wikipedia.org/wiki/Giuseppe_Sermonti">Giuseppe Sermonti</a> recognizes that “there never really has been a scientific theory of evolution”−a fact re-discovered by Plotkin.</p>
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		<title>Karabo Anti-Science Rhetoric</title>
		<link>http://www.darwinthenandnow.com/2011/09/karabo-anti-science-rhetoric/</link>
		<comments>http://www.darwinthenandnow.com/2011/09/karabo-anti-science-rhetoric/#comments</comments>
		<pubDate>Mon, 19 Sep 2011 00:36:36 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[What Scientists Say]]></category>
		<category><![CDATA[Australopithecus Sediba]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[fossil record]]></category>
		<category><![CDATA[human evolution]]></category>
		<category><![CDATA[Karabo]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[theory of evolution]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3385</guid>
		<description><![CDATA[Even while leading paleoanthropologists, including Bernard Wood, Donald Johanson, Fred Spoor, Ian Tattersal, and Tim White, are clearly convinced that Karabo is not a human ancestor the media continues to twist the evidence to support the evolution industry.  The handling of Karabo highlights, again, the anti-science rhetoric of the popular media to support of the evolution industry. ]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/09/karabo-anti-science-rhetoric/karabo-ii-2/" rel="attachment wp-att-3400"><img class="alignleft size-medium wp-image-3400" title="Karabo II" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/09/Karabo-II1-199x300.jpg" alt="" width="101" height="154" /></a>The fossil remains of<em> <a href="http://en.wikipedia.org/wiki/Australopithecus_sediba">Australopithecus sediba</a>, </em>nicknamed <a href="http://www.darwinthenandnow.com/2011/09/spinning-australopithecus-sediba-saga/">Karabo</a>,<em> </em>has generated a frenzy in the evolution loving media following the publication of five papers in the journal <a href="http://www.sciencemag.org/site/extra/sediba"><em>Science</em></a> on September 9, 2011. The intention of the papers was to finally resolving the long standing human evolution fossil record gap problem.</p>
<p>Using state-of-the-art radiological technologies, the papers focused on the comparing the shape and size of the <a href="http://www.sciencemag.org/content/333/6048/1402">cranium</a>, <a href="http://www.sciencemag.org/content/333/6048/1407">pelvis</a>, <a href="http://www.sciencemag.org/content/333/6048/1411">hand</a>, and <a href="http://www.sciencemag.org/content/333/6048/1417">ankle &amp; foot </a>of Karabo to humans. The fifth paper estimated the <a href="http://www.sciencemag.org/content/333/6048/1421">date</a> of the fossils mains using advanced Uranium-lead dating technologies. <span id="more-3385"></span></p>
<p>Within a week of publication, however, problems with the alleged fossil record gap resolution began to emerge. On top of the new problem list is the estimated dating of Karabo. <a href="http://en.wikipedia.org/wiki/Donald_C._Johanson">Donald Johanson</a> paleoanthropologist at Arizona State University and founder of the Institute of Human Origins at the University of California, Berkley, noted in <a href="http://www.nytimes.com/2011/09/09/science/09fossils.html?_r=2&amp;pagewanted=2"><em>The New York Times</em></a> that the dating “places the origins of <em>Homo</em> firmly in eastern Africa… prior to the dating of <em>A. sediba</em>.” If the dating is correct, then, this means that humans-like species came before Karabo, therefore, humans could not have descended from Karabo. That is a major hurdle for the fossil record gap problem.</p>
<p>Surprisingly, <a href="http://www.linkedin.com/pub/amina-khan/9/717/519">Amina Khan</a> of the <a href="http://articles.latimes.com/2011/sep/08/science/la-sci-australopithecus-fossils-20110909"><em>Los Angeles Times</em></a> picked up on the huddle: “But the age of the fossils presents a problem. The researchers&#8217; isotopic and magnetic dating showed the fossils were 1.977 million years old, about 300,000 years younger than a <em>Homo habilis</em> fossil that should have been their junior.”</p>
<p>Paleoanthropologist <a href="http://www.smithsonianmag.com/science-nature/interview-spoor.html">Fred Spoor</a> of University College London and the Max Planck Institute for Evolutionary Anthropology in Leipzig, Germany also pointed out that “could not themselves have given rise to Homo [human-like species]” according to <a href="http://www.anngibbons.com/">Ann Gibbons</a> in an article in <em><a href="http://www.sciencemag.org/content/333/6048/1370.short">Science</a> </em>entitled &#8220;Skeletons Present an Exquisite Paleo-Puzzle.&#8221;<em></em></p>
<p>The gaps in the fossil record continue to be a problem for developing a comprehensive theory of human evolution.  Last year,<a href="http://www.sciencemag.org/content/328/5975/154.short"> <em>Science</em></a> noted Johanson’s concern in the article entitle&#8221;Candidate Human Ancestor From South Africa Sparks Praise and Debate.&#8221; Johanson said that the “The oldest <em>Homo</em> specimens are scrappy and enigmatic, leaving researchers unsure about the evolutionary steps between the australopithecines and Homo. &#8230; The transition to Homo continues to be almost totally confusing.&#8221;</p>
<p><em>Science</em> pined that while &#8220;Our genus <em>Homo</em> is thought to have evolved… there are few fossils that provide detailed information on this transition.&#8221;</p>
<p>A recent <em><a href="http://abcnews.go.com/Technology/fossils-south-africa-called-evolutionary-game-changer/story?id=14474976">ABC New</a>s</em> article agrees, noting that “Scientists have long talked about a ‘missing link’ between very old fossils… There is a gap in the fossil record, so far unexplained. Does <em>Australopithecus sediba</em> help fill the gap? Not on its own, say most researchers…”</p>
<p>&#8220;The team says the new species may be the best candidate yet for the immediate ancestor of our genus, <em>Homo</em>,&#8221; wrote Michael Balter of the <em>Science</em> staff in an overview piece. However, &#8220;That last claim is a big one, and few scientists are ready to believe it themselves just yet.&#8221;</p>
<p>Writing in <em>Science</em> in 2010, paleoanthropologist and Professor of Integrative Biology at the <a title="University of California, Berkeley" href="http://en.wikipedia.org/wiki/University_of_California,_Berkeley">University of California, Berkeley</a>, Tim White, pointed out that &#8220;Given its late age and Australopithecus-grade anatomy, it contributes little to the understanding of the origin of genus Homo.&#8221; Picking up on the story, <em>Time</em> simply <a href="http://www.time.com/time/health/article/0,8599,1978726,00.html">reported</a> that “Tim White … believes <em>A. Sediba</em> bears no relationship to modern humans.”</p>
<p>After reviewing the most recent papers in <em>Science</em>, Professor of Human Origins at George Washington University, <a href="http://www.evolutionnews.org/2011/09/australopithecus_sediba_the_hy050831.html">Bernard Wood</a>, concluded that the reports are &#8220;a watershed in our understanding of human evolution, even if only to demonstrate that things are pretty complex”. Rather than clarifying human origins, Karabo complicates any presumed line of ancestral descent.</p>
<p>Ian Tattersall, <a title="Paleoanthropologist" href="http://en.wikipedia.org/wiki/Paleoanthropologist">paleoanthropologist</a> and a curator at the <a title="American Museum of Natural History" href="http://en.wikipedia.org/wiki/American_Museum_of_Natural_History">American Museum of Natural History</a>, resigned to the fact that the fossil evidence will never show the &#8220;leap to humans&#8221; because it happened &#8220;very suddenly”.</p>
<p>After 150 years since the publication of <a href="http://darwin-online.org.uk/contents.html#origin"><em>The Origin of Species</em></a>, the evidence continues to contradict rather than support <a href="http://darwin-online.org.uk/">Charles Darwin</a>’s theory of evolution−a problem Darwin was keenly aware of. As <a href="http://en.wikipedia.org/wiki/Steven_Gould">Steven Gould</a> noted in<em> <a href="http://en.wikipedia.org/wiki/The_Panda%27s_Thumb_(book)">The Panda’s Thumb</a></em>, &#8220;The fossil record had caused Darwin more grief than joy.”</p>
<p>Even while leading paleoanthropologists, including Bernard Wood, Donald Johanson, Fred Spoor, Ian Tattersal, and Tim White, are clearly convinced that Karabo is not a human ancestor the media continues to twist the evidence to support the evolution industry.  The handling of Karabo highlights, again, the anti-science rhetoric of the popular media to support of the evolution industry.</p>
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		<title>Campaign 2012, Paul Krugman &amp; Ann Coulter Spar on Evolution</title>
		<link>http://www.darwinthenandnow.com/2011/09/campaign-2012-paul-krugman-ann-coulter-spar-on-evolution/</link>
		<comments>http://www.darwinthenandnow.com/2011/09/campaign-2012-paul-krugman-ann-coulter-spar-on-evolution/#comments</comments>
		<pubDate>Mon, 05 Sep 2011 00:53:25 +0000</pubDate>
		<dc:creator>Richard William Nelson</dc:creator>
				<category><![CDATA[History of Evolution]]></category>
		<category><![CDATA[PopEvo News]]></category>
		<category><![CDATA[Altenberg-16]]></category>
		<category><![CDATA[Ann Coulter]]></category>
		<category><![CDATA[Charles Darwin]]></category>
		<category><![CDATA[evidence]]></category>
		<category><![CDATA[evolution]]></category>
		<category><![CDATA[fossil record]]></category>
		<category><![CDATA[genetics]]></category>
		<category><![CDATA[Origin of Species]]></category>
		<category><![CDATA[Paul Krugman]]></category>
		<category><![CDATA[Rick Perry]]></category>
		<category><![CDATA[theory of evolution]]></category>

		<guid isPermaLink="false">http://www.darwinthenandnow.com/?p=3314</guid>
		<description><![CDATA[After the sparring, the obvious fact emerges, Krugman, not the Republicans, represent news media “anti-science” journalism.]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.darwinthenandnow.com/2011/09/campaign-2012-paul-krugman-ann-coulter-spar-on-evolution/coulter-krugman/" rel="attachment wp-att-3317"><img class="alignleft size-medium wp-image-3317" title="Coulter &amp; Krugman" src="http://www.darwinthenandnow.com/wp-content/uploads/2011/09/Coulter-Krugman-300x222.jpg" alt="" width="258" height="180" /></a>On the 2012 presidential campaign tour in New Hampshire, the current Republican front-runner, Texas Governor <a href="http://governor.state.tx.us/">Rick Perry</a>, set off a media firestorm  responding to a question from a boy as prompted by his mother about the age of the Earth and evolution.</p>
<p>&#8220;I hear your mom was asking about evolution,&#8221; Perry said. &#8220;That&#8217;s a theory that is out there &#8212; and it&#8217;s got some gaps in it.&#8221; <span id="more-3314"></span></p>
<p>Writing in <em><a href="http://en.wikipedia.org/wiki/The_Guardian">The Guardian</a></em>, an original supported of <a href="http://darwin-online.org.uk/">Charles Darwin’s </a>theory of evolution starting in the nineteenth century, liberal commentator <a href="http://www.guardian.co.uk/profile/paul-krugman">Paul Krugman</a> in his column, <em><a href="http://observer.guardian.co.uk/">The Observer</a></em>, ran crazy with the comment in the article entitled “<a href="http://www.guardian.co.uk/commentisfree/2011/sep/04/evolution-climate-republicans-president">The Republicans are now the anti-science party, on climate change and evolution, the party&#8217;s presidential hopefuls are wilfully ignorant</a>.”</p>
<p>“Mr Perry, the governor of Texas,” according to Krugman, “recently made headlines by dismissing evolution as just a theory’, one that has &#8220;got some gaps in it&#8221;, an observation that will come as news to the vast majority of biologists.” Really?</p>
<p>Apparently, Krugman is “wilfully ignorant” about the “majority of biologists”. The book, <a href="http://mitpress.mit.edu/catalog/item/default.asp?ttype=2&amp;tid=12173"><em>Evolution</em>-the<em> Extended Synthesis</em></a> published by MIT Press explains in detail why the “gaps” in evolution theory still persist.</p>
<p>The<em> Evolution-the Extended Synthesis</em> was written by sixteen leading scientists from around the world that met in Altenberg, Austria during the summer of 2008. The purpose of the meeting was to develop a new unifying and comprehensive theory of evolution to eliminate the “gaps” as mentioned by Perry. This meeting has been since been popularly called the <a href="http://www.darwinthenandnow.com/altenberg-summit/">Altenberg-16 Summit</a>.</p>
<p>What emerged from the summit meeting, ironically, were sixteen different theories rather than a one unifying and comprehensive theory. Today, amazingly there are more “gaps” in the theory  of evolution than at any time since the publication of <em><a href="http://darwin-online.org.uk/contents.html#origin">The Origin of Species</a></em> by Darwin in 1859.</p>
<p>Kruger, apparently, is not aware of the controversies with the evolution of theories over the past 150 years, including <a href="http://en.wikipedia.org/wiki/Darwinism">Darwinism</a>, <a href="http://en.wikipedia.org/wiki/Neo-Darwinism">neo-Darwinism</a>, and the <a href="http://en.wikipedia.org/wiki/Modern_evolutionary_synthesis">Modern Evolutionary Synthesis</a>. No theory, to date, has arisen as an adequate unifying candidate to account for presumed evolution. Today, the field of evolution not only has gaps”, evolution is simply a philosophy without a scientific theory.</p>
<p><a href="http://www.anncoulter.com/">Ann Coulter</a> was quick to jump into the debate with the blog posted on <em><a href="http://www.humanevents.com/">Human Events</a></em>. However, unlike Kruger, Coulter in the post entitled “<a href="http://www.humanevents.com/article.php?id=45893">Liberals&#8217; View of Darwin Unable to Evolve</a>” on August 31<sup>st</sup> with substance rather than typical extinct rhetoric produced by the government financed evolution industry.</p>
<p>From the genetic evidence, Coulter points out that scientist now recognize that “the vast majority of mutations are deleterious to the organism.” Krugman, apparently, is “wilfully  ignorant” that mutations, the foundation of the Modern Evolutionary Synthesis theory, have been abandoned as a theoretical mechanism for evolution.</p>
<p>Damaged genetic data cannot pave a road to progressively greater complexity as once anticipated by genetic evolutionists during the twentieth century.</p>
<p>As Coulter notes, not only do evolutionists have a problem with the Modern Evolutionary Synthesis theory, they have problem with the fossil record: “We also ought to find a colossal number of transitional organisms in the fossil record &#8212; for example, a squirrel on its way to becoming a bat, or a bear becoming a whale,” “But that&#8217;s not what the fossil record shows. We don&#8217;t have fossils for any intermediate creatures in the process of evolving into something better. This is why the late Stephen Jay Gould of Harvard referred to the absence of transitional fossils as the ‘trade secret’ of paleontology.” Krugman, apparently, is “wilfully ignorant” that the fossil record is a problem, not a solution, for the evolution industry.</p>
<p>How did evolutionists end up with a problem rather than a viable theory? Coulter explains: “Darwinists start with a theory and then rearrange the evidence.” Krugman, apparently, is “wilfully ignorant” that starting with Darwin,<br />
the evolution industry has long since abandoned the <a href="http://www.darwinthenandnow.com/?p=292">scientific method</a>. After the sparring, the obvious fact emerges, Krugman, not the Republicans, represent news media “anti-science” journalism.</p>
<p>Never has a theory played such leverage in a national presidential election campaign. Perhaps, Coulter is wrong - the Krugman camp is evolving into extinction.</p>
<p>Go campaign 2012.</p>
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